<html><head></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; color: rgb(0, 0, 0); font-size: 14px; font-family: Calibri, sans-serif; "><div>Try 2.26 and let me know.</div><div><br></div><div>Thanks,</div><div>Carson</div><div><br></div><span id="OLK_SRC_BODY_SECTION"><div style="font-family:Calibri; font-size:11pt; text-align:left; color:black; BORDER-BOTTOM: medium none; BORDER-LEFT: medium none; PADDING-BOTTOM: 0in; PADDING-LEFT: 0in; PADDING-RIGHT: 0in; BORDER-TOP: #b5c4df 1pt solid; BORDER-RIGHT: medium none; PADDING-TOP: 3pt"><span style="font-weight:bold">From: </span> "Dian \"Oscar\" Jiao" <<a href="mailto:jiao@tacc.utexas.edu">jiao@tacc.utexas.edu</a>><br><span style="font-weight:bold">Date: </span> Thursday, 4 October, 2012 10:02 AM<br><span style="font-weight:bold">To: </span> Carson Holt <<a href="mailto:carsonhh@gmail.com">carsonhh@gmail.com</a>>, "<a href="mailto:maker-devel@yandell-lab.org">maker-devel@yandell-lab.org</a>" <<a href="mailto:maker-devel@yandell-lab.org">maker-devel@yandell-lab.org</a>><br><span style="font-weight:bold">Subject: </span> Re: [maker-devel] problem running maker<br></div><div><br></div><div><meta http-equiv="Content-Type" content="text/html; charset=us-ascii"><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; color: rgb(0, 0, 0); font-size: 14px; font-family: Calibri, sans-serif; "><div><div><div>2.10</div><div><div><div>-- </div><div><span class="Apple-style-span" style="font-size: 13px; font-family: Calibri; ">Dian (Oscar) Jiao, Ph.D.,<br>
Research Associate, Life Sciences Computing Group<br>
Texas Advanced Computing Center<br>
University of Texas at Austin<br>
<a href="mailto:jiao@tacc.utexas.edu">jiao@tacc.utexas.edu</a> | (832) 303-1166</span></div></div></div></div></div><div><br></div><span id="OLK_SRC_BODY_SECTION"><div style="font-family:Calibri; font-size:11pt; text-align:left; color:black; BORDER-BOTTOM: medium none; BORDER-LEFT: medium none; PADDING-BOTTOM: 0in; PADDING-LEFT: 0in; PADDING-RIGHT: 0in; BORDER-TOP: #b5c4df 1pt solid; BORDER-RIGHT: medium none; PADDING-TOP: 3pt"><span style="font-weight:bold">From: </span>Carson Holt <<a href="mailto:carsonhh@gmail.com">carsonhh@gmail.com</a>><br><span style="font-weight:bold">Date: </span>Thursday, October 4, 2012 7:27 AM<br><span style="font-weight:bold">To: </span>Oscar Jiao <<a href="mailto:jiao@tacc.utexas.edu">jiao@tacc.utexas.edu</a>>, "<a href="mailto:maker-devel@yandell-lab.org">maker-devel@yandell-lab.org</a>" <<a href="mailto:maker-devel@yandell-lab.org">maker-devel@yandell-lab.org</a>><br><span style="font-weight:bold">Subject: </span>Re: [maker-devel] problem running maker<br></div><div><br></div><div><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; color: rgb(0, 0, 0); font-size: 14px; font-family: Calibri, sans-serif; "><div>Are you trying to install 2.26 or 2.10?</div><div><br></div><div>--Carson</div><div><br></div><div><br></div><span id="OLK_SRC_BODY_SECTION"><div style="font-family:Calibri; font-size:11pt; text-align:left; color:black; BORDER-BOTTOM: medium none; BORDER-LEFT: medium none; PADDING-BOTTOM: 0in; PADDING-LEFT: 0in; PADDING-RIGHT: 0in; BORDER-TOP: #b5c4df 1pt solid; BORDER-RIGHT: medium none; PADDING-TOP: 3pt"><span style="font-weight:bold">From: </span>"Dian \"Oscar\" Jiao" <<a href="mailto:jiao@tacc.utexas.edu">jiao@tacc.utexas.edu</a>><br><span style="font-weight:bold">Date: </span>Thursday, 4 October, 2012 12:04 AM<br><span style="font-weight:bold">To: </span>"<a href="mailto:maker-devel@yandell-lab.org">maker-devel@yandell-lab.org</a>" <<a href="mailto:maker-devel@yandell-lab.org">maker-devel@yandell-lab.org</a>><br><span style="font-weight:bold">Subject: </span>[maker-devel] problem running maker<br></div><div><br></div><div dir="ltr"><style type="text/css" id="owaParaStyle"></style><div fpstyle="1" ocsi="0"><div style="direction: ltr;font-family: Tahoma;color: #000000;font-size: 10pt;"><div style="font-family: Calibri, sans-serif; font-size: 14px; ">Hi, </div><div style="font-family: Calibri, sans-serif; font-size: 14px; "><br></div><div style="font-family: Calibri, sans-serif; font-size: 14px; ">I just installed maker and tried to run it with these dpp example fasta files that came with the package. However when I do "maker maker_opts.ctl maker_bopts.ctl maker_exe.ctl", I got the following
errors. It looks like there are three errors: (1) defined array deprecated; (2) unknown state in Signal.pm and (3) GDBM_File (etc.) missing</div><div style="font-family: Calibri, sans-serif; font-size: 14px; "><br></div><div style="font-family: Calibri, sans-serif; font-size: 14px; ">The first line seems to be just warning. I got it even when I do just "maker" or "maker ctl". The control files did get generated. And what is the relationship between the three perl modules,
GDBM/NDBM/SDBM_File, AnyDBM and DB_File? </div><div style="font-family: Calibri, sans-serif; font-size: 14px; "><br></div><div style="font-family: Calibri, sans-serif; font-size: 14px; ">Oscar</div><div><br></div></div></div></div>
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