<html><head><base href="x-msg://15/"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div><div>On Apr 6, 2013, at 12:45 PM, Kang, Yang Jae wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><span class="Apple-style-span" style="border-collapse: separate; font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; font-size: medium; "><div lang="KO" link="blue" vlink="purple"><div class="WordSection1" style="page: WordSection1; "><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 'Malgun Gothic'; color: rgb(31, 73, 125); ">Thank you for quick response again!<o:p></o:p></span></div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 'Malgun Gothic'; color: rgb(31, 73, 125); "><o:p> </o:p></span></div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 'Malgun Gothic'; color: rgb(31, 73, 125); ">I found the non-ATG starting sequences in transcript file. I thought this would be the UTR traces, and </span></div></div></div></span></blockquote><div><br></div><div>The gene predictors will occasionally produce a transcript with no start/stop codon, set always_complete=1 in maker_opts.clt to get MAKER to try hard to force a start/stop codon.</div><div><br></div><blockquote type="cite"><span class="Apple-style-span" style="border-collapse: separate; font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; font-size: medium; "><div lang="KO" link="blue" vlink="purple"><div class="WordSection1" style="page: WordSection1; "><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 'Malgun Gothic'; color: rgb(31, 73, 125); ">I additionally found the offset value some position after ‘>’ letter. Is that indicate the starting ATG?</span></div></div></div></span></blockquote><div><br></div><div>I didn't really understand that question...</div><br><blockquote type="cite"><span class="Apple-style-span" style="border-collapse: separate; font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; font-size: medium; "><div lang="KO" link="blue" vlink="purple"><div class="WordSection1" style="page: WordSection1; "><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 'Malgun Gothic'; color: rgb(31, 73, 125); "><o:p></o:p></span></div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 'Malgun Gothic'; color: rgb(31, 73, 125); ">Secondly, there is several files named *.augustus_masked.proteins.fasta, *.non_overlapping_ab_initio.proteins.fasta, and *.proteins.fasta. What is the criteria of splitting those files? The reason why I’m asking is that some genes were </span></div></div></div></span></blockquote><div><br></div><div>augustus_masked is a file that contains proteins of all predictions make by Augustus when working on masked sequence. Setting unmask=1 in maker_opts.ctl would instruct MAKER to also run the gene predictors on unmasked sequence and then you'd have a augustus_unmasked file for those predicitions. The non_overlapping_ab_initio files contain proteins predicted by all gene predictors for which MAKER could not find protein/RNA evidence for, so they are unsupported by physical evidence. These unsupported predictions are not promoted by MAKER into annotations in it's final output, but they are included in these files in case you want to work with them. The non_overlapping part of the name means that if multiple gene predictors produce overlapping un support ab initio predictions then MAKER will only output one of them.</div><div><br></div><div><br></div><blockquote type="cite"><span class="Apple-style-span" style="border-collapse: separate; font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; font-size: medium; "><div lang="KO" link="blue" vlink="purple"><div class="WordSection1" style="page: WordSection1; "><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 'Malgun Gothic'; color: rgb(31, 73, 125); ">redundant between *.augustus_masked.proteins.fasta and *.proteins.fasta.<o:p></o:p></span></div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 'Malgun Gothic'; color: rgb(31, 73, 125); "></span></div></div></div></span></blockquote><div><br></div><div>Yes, the proteins for genes for which MAKER creates annotations will be in both files.</div><br><blockquote type="cite"><span class="Apple-style-span" style="border-collapse: separate; font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; font-size: medium; "><div lang="KO" link="blue" vlink="purple"><div class="WordSection1" style="page: WordSection1; "><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 'Malgun Gothic'; color: rgb(31, 73, 125); "><o:p> </o:p></span></div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 'Malgun Gothic'; color: rgb(31, 73, 125); ">Thank you<o:p></o:p></span></div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 'Malgun Gothic'; color: rgb(31, 73, 125); "><o:p> </o:p></span></div><div><div style="border-right-style: none; border-bottom-style: none; border-left-style: none; border-width: initial; border-color: initial; border-top-style: solid; border-top-color: rgb(181, 196, 223); border-top-width: 1pt; padding-top: 3pt; padding-right: 0cm; padding-bottom: 0cm; padding-left: 0cm; "><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><b><span lang="EN-US" style="font-size: 10pt; font-family: Tahoma, sans-serif; ">From:</span></b><span lang="EN-US" style="font-size: 10pt; font-family: Tahoma, sans-serif; "><span class="Apple-converted-space"> </span>Carson Holt [mailto:carsonhh@gmail.com]<span class="Apple-converted-space"> </span><br><b>Sent:</b><span class="Apple-converted-space"> </span>Sunday, April 07, 2013 12:13 AM<br><b>To:</b><span class="Apple-converted-space"> </span>Michael Thon; Kang, Yang Jae<br><b>Cc:</b><span class="Apple-converted-space"> </span><a href="mailto:maker-devel@yandell-lab.org">maker-devel@yandell-lab.org</a><br><b>Subject:</b><span class="Apple-converted-space"> </span>Re: [maker-devel] CDS retrieve from augustus_masked<o:p></o:p></span></div></div></div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US"><o:p> </o:p></span></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10.5pt; font-family: Calibri, sans-serif; color: black; ">Augustus only predicts UTR for a handful of organisms. I trim them off the rejected models before outputting to the GFF3 as match/match_part features (per my previous e-mail concerning the limitations of GFF3).<o:p></o:p></span></div></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10.5pt; font-family: Calibri, sans-serif; color: black; "><o:p> </o:p></span></div></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10.5pt; font-family: Calibri, sans-serif; color: black; "> --Carson<o:p></o:p></span></div></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10.5pt; font-family: Calibri, sans-serif; color: black; "><o:p> </o:p></span></div></div><div style="border-right-style: none; border-bottom-style: none; border-left-style: none; border-width: initial; border-color: initial; border-top-style: solid; border-top-color: rgb(181, 196, 223); border-top-width: 1pt; padding-top: 3pt; padding-right: 0cm; padding-bottom: 0cm; padding-left: 0cm; "><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><b><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: black; ">From:<span class="Apple-converted-space"> </span></span></b><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: black; ">Michael Thon <<a href="mailto:mike.thon@gmail.com" style="color: blue; text-decoration: underline; ">mike.thon@gmail.com</a>><br><b>Date:<span class="Apple-converted-space"> </span></b>Saturday, 6 April, 2013 10:37 AM<br><b>To:<span class="Apple-converted-space"> </span></b>"Kang, Yang Jae" <<a href="mailto:kangyangjae@gmail.com" style="color: blue; text-decoration: underline; ">kangyangjae@gmail.com</a>><br><b>Cc:<span class="Apple-converted-space"> </span></b><<a href="mailto:maker-devel@yandell-lab.org" style="color: blue; text-decoration: underline; ">maker-devel@yandell-lab.org</a>><br><b>Subject:<span class="Apple-converted-space"> </span></b>Re: [maker-devel] CDS retrieve from augustus_masked<o:p></o:p></span></div></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10.5pt; font-family: Calibri, sans-serif; color: black; "><o:p> </o:p></span></div></div><div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10.5pt; font-family: Calibri, sans-serif; color: black; ">Thats a good point because 'transcripts' implies that it would have the UTRs. Does augustus predict the UTRs? I manually checked the translations of the .transcript. file and I only found valid translations but that does not mean that UTRs could not be present...<o:p></o:p></span></div><div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10.5pt; font-family: Calibri, sans-serif; color: black; ">On Apr 6, 2013, at 1:24 PM, "Kang, Yang Jae" <<a href="mailto:kangyangjae@gmail.com" style="color: blue; text-decoration: underline; ">kangyangjae@gmail.com</a>> wrote:<o:p></o:p></span></div></div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10.5pt; font-family: Calibri, sans-serif; color: black; "><br><br><o:p></o:p></span></div><div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 'Malgun Gothic'; color: rgb(31, 73, 125); ">Thank for your quick response Mike</span><span lang="EN-US" style="color: black; "><o:p></o:p></span></div></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 'Malgun Gothic'; color: rgb(31, 73, 125); ">I looked the file named transcript, but it might include UTRs I suspect. What I want to do is calculating Ka Ks values so that I need coding sequences. Is there any indication where is exact START and STOP in the transcript file?</span><span lang="EN-US" style="color: black; "><o:p></o:p></span></div></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 'Malgun Gothic'; color: rgb(31, 73, 125); "> </span><span lang="EN-US" style="color: black; "><o:p></o:p></span></div></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 'Malgun Gothic'; color: rgb(31, 73, 125); ">Thank you</span><span lang="EN-US" style="color: black; "><o:p></o:p></span></div></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 'Malgun Gothic'; color: rgb(31, 73, 125); "> </span><span lang="EN-US" style="color: black; "><o:p></o:p></span></div></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 'Malgun Gothic'; color: rgb(31, 73, 125); "> </span><span lang="EN-US" style="color: black; "><o:p></o:p></span></div></div><div><div style="border-right-style: none; border-bottom-style: none; border-left-style: none; border-width: initial; border-color: initial; border-top-style: solid; border-top-color: rgb(181, 196, 223); border-top-width: 1pt; padding-top: 3pt; padding-right: 0cm; padding-bottom: 0cm; padding-left: 0cm; "><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><b><span lang="EN-US" style="font-size: 10pt; font-family: Tahoma, sans-serif; color: black; ">From:</span></b><span class="apple-converted-space"><span lang="EN-US" style="font-size: 10pt; font-family: Tahoma, sans-serif; color: black; "> </span></span><span lang="EN-US" style="font-size: 10pt; font-family: Tahoma, sans-serif; color: black; ">Michael Thon [<a href="mailto:mike.thon@" style="color: blue; text-decoration: underline; ">mailto:mike.thon@</a><a href="http://gmail.com" style="color: blue; text-decoration: underline; ">gmail.com</a>]<span class="apple-converted-space"> </span><br><b>Sent:</b><span class="apple-converted-space"> </span>Saturday, April 06, 2013 8:20 PM<br><b>To:</b><span class="apple-converted-space"> </span>Kang, Yang Jae<br><b>Cc:</b><span class="apple-converted-space"> </span><a href="mailto:maker-devel@yandell-lab.org" style="color: blue; text-decoration: underline; ">maker-devel@yandell-lab.org</a><br><b>Subject:</b><span class="apple-converted-space"> </span>Re: [maker-devel] CDS retrieve from augustus_masked</span><span lang="EN-US" style="color: black; "><o:p></o:p></span></div></div></div></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="color: black; "> <o:p></o:p></span></div></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="color: black; ">Hi Kang - After running fasta_merge there should be a file:<o:p></o:p></span></div></div><div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="color: black; "> <o:p></o:p></span></div></div></div><div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="color: black; ">[prefix].all.maker.augustus_masked.transcripts.fasta<o:p></o:p></span></div></div><div><div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="color: black; "> <o:p></o:p></span></div></div></div><div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="color: black; ">in the output directory. Is that what you need?<o:p></o:p></span></div></div></div><div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="color: black; ">Mike<o:p></o:p></span></div></div></div><div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="color: black; "> <o:p></o:p></span></div></div></div><div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="color: black; ">On Apr 6, 2013, at 9:25 AM, "Kang, Yang Jae" <<a href="mailto:kangyangjae@gmail.com" style="color: blue; text-decoration: underline; "><span style="color: purple; ">kangyangjae@gmail.com</span></a>> wrote:<o:p></o:p></span></div></div></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="color: black; "><br><br><br><o:p></o:p></span></div></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; text-align: justify; "><span lang="EN-US" style="font-size: 10pt; font-family: 맑은고딕, serif; color: black; ">Dear everyone!</span><span lang="EN-US" style="color: black; "><o:p></o:p></span></div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; text-align: justify; "><span lang="EN-US" style="font-size: 10pt; font-family: Helvetica, sans-serif; color: black; "> </span><span lang="EN-US" style="color: black; "><o:p></o:p></span></div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; text-align: justify; "><span lang="EN-US" style="font-size: 10pt; font-family: 맑은고딕, serif; color: black; ">I want to retrieve CDS sequences from the output of maker; however, in the augustus_masked feature there is no indication of CDS or Exon like maker features. Is there any way for me to retrieve CDS from augustus_masked? There were protein sequences in outdir but no CDS information.</span><span lang="EN-US" style="color: black; "><o:p></o:p></span></div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; text-align: justify; "><span lang="EN-US" style="font-size: 10pt; font-family: Helvetica, sans-serif; color: black; "> </span><span lang="EN-US" style="color: black; "><o:p></o:p></span></div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; text-align: justify; "><span lang="EN-US" style="font-size: 10pt; font-family: 맑은고딕, serif; color: black; ">Thank you!</span><span lang="EN-US" style="color: black; "><o:p></o:p></span></div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; text-align: justify; "><span lang="EN-US" style="font-size: 10pt; font-family: Helvetica, sans-serif; color: black; "> </span><span lang="EN-US" style="color: black; "><o:p></o:p></span></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><b><span lang="EN-US" style="font-size: 10pt; font-family: 맑은고딕, serif; color: black; ">Kang, Yang Jae</span></b><span lang="EN-US" style="color: black; "><o:p></o:p></span></div></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 맑은고딕, serif; color: black; ">Ph.D.</span><span lang="EN-US" style="color: black; "><o:p></o:p></span></div></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 맑은고딕, serif; color: black; ">Cropgenomics Lab.</span><span lang="EN-US" style="color: black; "><o:p></o:p></span></div></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 맑은고딕, serif; color: black; ">College of Agriculture and Life Science</span><span lang="EN-US" style="color: black; "><o:p></o:p></span></div></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 맑은고딕, serif; color: black; ">Seoul National University</span><span lang="EN-US" style="color: black; "><o:p></o:p></span></div></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10pt; font-family: 맑은고딕, serif; color: black; ">Korea</span><span lang="EN-US" style="color: black; "><o:p></o:p></span></div></div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; text-align: justify; "><span lang="EN-US" style="font-size: 10pt; font-family: Helvetica, sans-serif; color: black; "> </span><span lang="EN-US" style="color: black; "><o:p></o:p></span></div><div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 13.5pt; font-family: Helvetica, sans-serif; color: black; ">_______________________________________________<br>maker-devel mailing list<br><a href="mailto:maker-devel@box290.bluehost.com" style="color: blue; text-decoration: underline; "><span style="color: purple; ">maker-devel@box290.bluehost.com</span></a><br><a href="http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org" style="color: blue; text-decoration: underline; "><span style="color: purple; ">http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org</span></a></span><span lang="EN-US" style="color: black; "><o:p></o:p></span></div></div></div></div></div></div></div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10.5pt; font-family: Calibri, sans-serif; color: black; "><o:p> </o:p></span></div></div></div><div style="margin-top: 0cm; margin-right: 0cm; margin-left: 0cm; margin-bottom: 0.0001pt; font-size: 12pt; font-family: Gulim; "><span lang="EN-US" style="font-size: 10.5pt; font-family: Calibri, sans-serif; color: black; ">_______________________________________________ maker-devel mailing list<span class="Apple-converted-space"> </span><a href="mailto:maker-devel@box290.bluehost.com" style="color: blue; text-decoration: underline; ">maker-devel@box290.bluehost.com</a><a href="http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org" style="color: blue; text-decoration: underline; ">http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org</a><o:p></o:p></span></div></div>_______________________________________________<br>maker-devel mailing list<br><a href="mailto:maker-devel@box290.bluehost.com">maker-devel@box290.bluehost.com</a><br>http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org</div></span></blockquote></div><br><div>
<span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-size: medium; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; "><div><span class="Apple-style-span" style="font-family: Arial; font-size: 12px; "><div>Barry Moore</div><div>Research Scientist</div><div>Dept. of Human Genetics</div><div>University of Utah</div><div>Salt Lake City, UT 84112</div><div>--------------------------------------------</div><div>(801) 585-3543</div><div><br class="khtml-block-placeholder"></div></span></div><div><br></div></span><br class="Apple-interchange-newline">
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