<html><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; ">Oh yes I did- I took just the non sequence entries in the gff file and used that as my input. I will rerun snap with the gff file containing the sequences as well. <div><br></div><div>I'm attaching a snippet of the gff file that I used as input to maker2zff.</div><div><br></div><div>Thanks for your help</div><div>Dhivya</div><div><br></div><div></div></body></html>