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<p class="MsoNormal"><span style="color:#1F497D">Yep I am.<o:p></o:p></span></p>
<p class="MsoNormal"><span style="color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="color:#1F497D">I’ll try upgrading.<o:p></o:p></span></p>
<p class="MsoNormal"><span style="color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="color:#1F497D">Thanks<o:p></o:p></span></p>
<p class="MsoNormal"><span style="color:#1F497D">Rob<o:p></o:p></span></p>
<p class="MsoNormal"><span style="color:#1F497D"><o:p> </o:p></span></p>
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<p class="MsoNormal"><b><span lang="EN-US" style="font-size:10.0pt;font-family:"Tahoma","sans-serif";mso-fareast-language:EN-GB">From:</span></b><span lang="EN-US" style="font-size:10.0pt;font-family:"Tahoma","sans-serif";mso-fareast-language:EN-GB"> Carson
Holt [mailto:carsonhh@gmail.com] <br>
<b>Sent:</b> 16 April 2014 22:56<br>
<b>To:</b> Robert King (RRes-Roth); maker-devel@yandell-lab.org<br>
<b>Subject:</b> Re: [maker-devel] scalar text in maker transcripts<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:10.5pt;color:black">The only time I have seen this is when fgenesh is used as a predictor and correct_est_fusion=1 is set (it was a bug in trimming long UTR's on fgenesh models). Is that how you have your job configured?
If so, that particular bug is fixed in the current MAKER release.<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:10.5pt;color:black">Thanks,<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:10.5pt;color:black">Carson<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:10.5pt;color:black"><o:p> </o:p></span></p>
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<p class="MsoNormal"><b><span style="color:black">From: </span></b><span style="color:black">"Robert King (RRes-Roth)" <<a href="mailto:robert.king@rothamsted.ac.uk">robert.king@rothamsted.ac.uk</a>><br>
<b>Date: </b>Wednesday, April 16, 2014 at 5:27 AM<br>
<b>To: </b>"<a href="mailto:maker-devel@yandell-lab.org">maker-devel@yandell-lab.org</a>" <<a href="mailto:maker-devel@yandell-lab.org">maker-devel@yandell-lab.org</a>><br>
<b>Subject: </b>[maker-devel] scalar text in maker transcripts<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:10.5pt;color:black"><o:p> </o:p></span></p>
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<p class="MsoNormal"><span style="color:black">Hi,<o:p></o:p></span></p>
<p class="MsoNormal"><span style="color:black"> <o:p></o:p></span></p>
<p class="MsoNormal"><span style="color:black">I’ve got some strange characters in my maker transcripts (I used keep predictions). I opened the file in wordpad<o:p></o:p></span></p>
<p class="MsoNormal" style="text-autospace:none"><span style="font-family:"Courier New";color:black">ACTTCGACATTCTCCGTCACCAATTCAATCACCCCACACGAACAACCATCGGAGCCTCCC</span><span style="color:black"><o:p></o:p></span></p>
<p class="MsoNormal" style="text-autospace:none"><span style="font-family:"Courier New";color:black">AGAACTCGCATTACCGACTTCAAGATGTCSCALAR(0xf5397d8)SCALAR(0xc4cad</span><span style="color:black"><o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-family:"Courier New";color:black">88)CTTCTTTCTACGGCGCTGGCCGCAAGGTCCTCGGCTACAACTCTTACTTCGGAAACT</span><span style="color:black"><o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-family:"Courier New";color:black"> </span><span style="color:black"><o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-family:"Courier New";color:black">Any ideas what may cause this?
</span><span style="color:black"><o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-family:"Courier New";color:black">Thanks</span><span style="color:black"><o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-family:"Courier New";color:black">Rob</span><span style="color:black"><o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.5pt;color:black;mso-fareast-language:EN-GB"><br>
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