<html><head></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; color: rgb(0, 0, 0); font-size: 14px; font-family: Calibri, sans-serif;"><div>Could you pack up this directory for me --> <span style="font-family: Calibri; font-size: medium;">/84/ED/scaffold3.1/ and upload it here --> </span><a href="http://weatherby.genetics.utah.edu/cgi-bin/mwas/bug.cgi">http://weatherby.genetics.utah.edu/cgi-bin/mwas/bug.cgi</a></div><div><br></div><div>Thanks,</div><div>Carson</div><div><br></div><div><br></div><span id="OLK_SRC_BODY_SECTION"><div style="font-family:Calibri; font-size:11pt; text-align:left; color:black; BORDER-BOTTOM: medium none; BORDER-LEFT: medium none; PADDING-BOTTOM: 0in; PADDING-LEFT: 0in; PADDING-RIGHT: 0in; BORDER-TOP: #b5c4df 1pt solid; BORDER-RIGHT: medium none; PADDING-TOP: 3pt"><span style="font-weight:bold">From: </span> Michael Seidl <<a href="mailto:michael.seidl@wur.nl">michael.seidl@wur.nl</a>><br><span style="font-weight:bold">Date: </span> Tuesday, April 22, 2014 at 8:43 AM<br><span style="font-weight:bold">To: </span> Carson Holt <<a href="mailto:carsonhh@gmail.com">carsonhh@gmail.com</a>><br><span style="font-weight:bold">Cc: </span> "<a href="mailto:maker-devel@yandell-lab.org">maker-devel@yandell-lab.org</a>" <<a href="mailto:maker-devel@yandell-lab.org">maker-devel@yandell-lab.org</a>><br><span style="font-weight:bold">Subject: </span> Re: [maker-devel] thousands of array-refs in merged .gff after 'gff3_merge'<br></div><div><br></div><div dir="ltr"><div class="gmail_extra"><br><div class="gmail_quote">On Tue, Apr 22, 2014 at 4:39 PM, Carson Holt <span dir="ltr"><<a href="mailto:carsonhh@gmail.com" target="_blank">carsonhh@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">any</blockquote></div><br></div><div class="gmail_extra">Dear Carson,<br><br></div><div class="gmail_extra">
maker -version returns 2.31. Yes, also the individual scaffolds seem to contain ARRAY refs, e.g.<br>find -name "*gff" | xargs grep "ARRAY":<br><br>./84/ED/scaffold3.1/theVoid.scaffold3.1/evidence_6.gff:ARRAY(0x41f6ea0)<br>
./84/ED/scaffold3.1/theVoid.scaffold3.1/evidence_6.gff:ARRAY(0xb87d888)<br>./84/ED/scaffold3.1/theVoid.scaffold3.1/evidence_6.gff:ARRAY(0xd343528)<br>./84/ED/scaffold3.1/theVoid.scaffold3.1/evidence_6.gff:ARRAY(0xb12fc48)<br>
./84/ED/scaffold3.1/theVoid.scaffold3.1/evidence_6.gff:ARRAY(0xde02488)<br>./84/ED/scaffold3.1/theVoid.scaffold3.1/evidence_6.gff:ARRAY(0x8d4c698)<br>./84/ED/scaffold3.1/theVoid.scaffold3.1/evidence_6.gff:ARRAY(0x447a8a0)<br>
./84/ED/scaffold3.1/theVoid.scaffold3.1/evidence_6.gff:ARRAY(0x4390048)<br>./84/ED/scaffold3.1/theVoid.scaffold3.1/evidence_6.gff:ARRAY(0xdbb4e00)<br>./84/ED/scaffold3.1/theVoid.scaffold3.1/evidence_6.gff:ARRAY(0xe3f1790)<br>
./84/ED/scaffold3.1/theVoid.scaffold3.1/evidence_6.gff:ARRAY(0x438d570)<br>./84/ED/scaffold3.1/theVoid.scaffold3.1/evidence_6.gff:ARRAY(0xae00088<br><br></div><div class="gmail_extra">Cheers<br>M<br></div><div class="gmail_extra"><br></div></div></span></body></html>