<div dir="ltr"><div class="gmail_extra">Hi Carson,</div><div class="gmail_extra"><br><div class="gmail_quote">On Mon, May 5, 2014 at 2:44 PM, Carson Holt <span dir="ltr"><<a href="mailto:carsonhh@gmail.com" target="_blank">carsonhh@gmail.com</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-color:rgb(204,204,204);border-left-style:solid;padding-left:1ex"><div>df -h /Volumes/Qnap/projects/projectAnwar_SNGN0016AA-A</div>
</blockquote></div><div class="gmail_extra"><br></div><div class="gmail_extra"><div class="gmail_extra">Filesystem Type Size Used Avail Use% Mounted on</div><div class="gmail_extra">10.0.1.128:/projects</div><div class="gmail_extra">
nfs 13T 9.6T 3.1T 76% /Volumes/Qnap</div></div><br>That one is on NFS, although the second tarball I uploaded was done in the /tmp dir, and that's on a local disk:</div><div class="gmail_extra">
<br>
</div><div class="gmail_extra"><div class="gmail_extra">Filesystem Type Size Used Avail Use% Mounted on</div><div class="gmail_extra">/dev/mapper/vg_d5-lv_root</div><div class="gmail_extra"> ext4 50G 8.9G 38G 19% /</div>
<blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-color:rgb(204,204,204);border-left-style:solid;padding-left:1ex"><ol style="color:rgb(0,0,0);font-family:Calibri,sans-serif;font-size:14.399999618530273px">
<li>Is you /tmp directory full (or whatever you have $TMPDIR environmental variable is set to). Use 'df -h /tmp' to check.</li></ol></blockquote><div><br></div><div><div>$ df -h /tmp</div><div>Filesystem Type Size Used Avail Use% Mounted on</div>
<div>/dev/mapper/vg_d5-lv_root</div><div> ext4 50G 8.9G 38G 19% /</div></div><div> <br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-color:rgb(204,204,204);border-left-style:solid;padding-left:1ex">
<ol style="color:rgb(0,0,0);font-family:Calibri,sans-serif;font-size:14.399999618530273px"><li>Are you running in a directory on an NFS drive? Is it true NFS or is it something like FUSE.</li></ol></blockquote><div>Same error on true NFS or on local disk.</div>
<div><br></div><div> </div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-color:rgb(204,204,204);border-left-style:solid;padding-left:1ex"><ol style="color:rgb(0,0,0);font-family:Calibri,sans-serif;font-size:14.399999618530273px">
<li>Is your current working directory full.</li></ol></blockquote><div>No.</div><div><br></div><div> </div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-color:rgb(204,204,204);border-left-style:solid;padding-left:1ex">
<ol style="color:rgb(0,0,0);font-family:Calibri,sans-serif;font-size:14.399999618530273px"><li>Are you setting TMP= in the control files to either an NFS mounted location or an in memory mounted location. Same issue if you are setting the system's TMPDIR environmental variable to one of these.</li>
</ol></blockquote><div>I tried setting it to /tmp just to be sure (no difference).</div><div> </div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-color:rgb(204,204,204);border-left-style:solid;padding-left:1ex">
<ol style="color:rgb(0,0,0);font-family:Calibri,sans-serif;font-size:14.399999618530273px"><li>Is your default /tmp directory in fact locally mounted (some clusters set this to in memory scratch).</li></ol></blockquote><div>
Yes.</div><div> </div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-color:rgb(204,204,204);border-left-style:solid;padding-left:1ex"><ol style="color:rgb(0,0,0);font-family:Calibri,sans-serif;font-size:14.399999618530273px">
<li>Even though you already checked, humor me and run this exact command --> /Volumes/Qnap/external/Linux_x86_64/ncbi-blast/bin/blastx -version</li></ol></blockquote><div class="gmail_extra"><br></div><div class="gmail_extra">
$ /Volumes/Qnap/external/Linux_x86_64/ncbi-blast/bin/blastx -version<br></div><div class="gmail_extra"><div class="gmail_extra">blastx: 2.2.28+</div><div class="gmail_extra">Package: blast 2.2.28, build Mar 12 2013 16:52:31</div>
</div><div class="gmail_extra"><br></div><div class="gmail_extra"><br></div><div class="gmail_extra"><br></div><div class="gmail_extra">Thanks so much for your help.</div><div class="gmail_extra"><br></div><div class="gmail_extra">
<div class="gmail_extra">Best,</div><div class="gmail_extra">Dave</div><div><br></div><div><br></div></div><div class="gmail_extra"><br></div><div class="gmail_extra"><br></div></div></div>