<html><head></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;"><p>Excellent. Thanks, Carson. Is the <code>rmlib</code> feature included in 2.31.5? What is the purpose of the label? Does it affect the GFF file output by MAKER?</p>
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.error { color:#AA0000; }</style></p><div id="bloop_customfont" style="font-family:Helvetica,Arial;font-size:13px; color: rgba(0,0,0,1.0); margin: 0px; line-height: auto;"><br></div> <div id="bloop_sign_1400273100393145088" class="bloop_sign"><div style="font-family:helvetica,arial;font-size:13px">-- <br><a href="http://sjackman.ca">http://sjackman.ca</a></div></div> <br><p style="color:#000;">On 2014-May-16 at 13:33:23 , Carson Holt (<a href="mailto:carsonhh@gmail.com">carsonhh@gmail.com</a>) wrote:</p> <blockquote type="cite" class="clean_bq"><span><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; color: rgb(0, 0, 0); font-size: 14px; font-family: Calibri, sans-serif;"><div></div><div>
<title></title>
<div>It could be done. I've made some changes to the
subversion repository if you want to test it. You should also
be able to use labels just as you can with other comma separated
lists in MAKER using ':' to separate the label.</div>
<div><br></div>
<div>Example -->
rmlib=repeats.fasta:some_label,repeats2.fasta:another_label</div>
<div><br></div>
<div>I've also found the other_gff issue. It was fixed in the
subversion repository but not in the release package I made the
other day, so I've updated the release to 2.31.5.</div>
<div><br></div>
<div>--Carson</div>
<div><br></div>
<div><br></div>
<div><br></div>
<div><br></div>
<span id="OLK_SRC_BODY_SECTION"></span>
<div style="font-family:Calibri; font-size:11pt; text-align:left; color:black; BORDER-BOTTOM: medium none; BORDER-LEFT: medium none; PADDING-BOTTOM: 0in; PADDING-LEFT: 0in; PADDING-RIGHT: 0in; BORDER-TOP: #b5c4df 1pt solid; BORDER-RIGHT: medium none; PADDING-TOP: 3pt">
<span id="OLK_SRC_BODY_SECTION"><span style="font-weight:bold">From:</span> Shaun Jackman <<a href="mailto:sjackman@gmail.com">sjackman@gmail.com</a>><br>
<span style="font-weight:bold">Reply-To:</span> Shaun Jackman
<<a href="mailto:sjackman@gmail.com">sjackman@gmail.com</a>><br>
<span style="font-weight:bold">Date:</span> Friday, May 16, 2014 at
11:16 AM<br>
<span style="font-weight:bold">To:</span> "<a href="mailto:maker-devel@yandell-lab.org">maker-devel@yandell-lab.org</a>"
<<a href="mailto:maker-devel@yandell-lab.org">maker-devel@yandell-lab.org</a>><br>
<span style="font-weight:bold">Subject:</span> [maker-devel]
Specify multiple files to rmlib<br></span></div>
<div><br></div>
<div dir="ltr">
<div class="markdown-here-wrapper" id="markdown-here-wrapper-330546" style="">
<p style="margin:1.2em 0px!important">Hi, Carson. Some options of
maker accept multiple files as a comma separated list, but
<code style="font-size:0.85em;font-family:Consolas,Inconsolata,Courier,monospace;margin:0px 0.15em;padding:0px 0.3em;white-space:pre-wrap;border:1px solid rgb(234,234,234);background-color:rgb(248,248,248);border-top-left-radius:3px;border-top-right-radius:3px;border-bottom-right-radius:3px;border-bottom-left-radius:3px;display:inline">
rmlib</code> does not. Could it?</p>
<p style="margin:1.2em 0px!important">Thanks!<br>
Shaun</p>
<p style="margin:1.2em 0px!important">P.S. Any update on the fix to
<code style="font-size:0.85em;font-family:Consolas,Inconsolata,Courier,monospace;margin:0px 0.15em;padding:0px 0.3em;white-space:pre-wrap;border:1px solid rgb(234,234,234);background-color:rgb(248,248,248);border-top-left-radius:3px;border-top-right-radius:3px;border-bottom-right-radius:3px;border-bottom-left-radius:3px;display:inline">
other_gff</code>?</p>
<p style="margin:1.2em 0px!important"><a href="http://sjackman.ca"></a><a href="http://sjackman.ca">http://sjackman.ca</a></p>
</div>
</div>
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