SHARED_ID	6b0ceb32290264868d0e6d5c37b111fb	
CTL_OPTIONS	maker_gff	
CTL_OPTIONS	other_gff	
CTL_OPTIONS	est	
CTL_OPTIONS	est_reads	
CTL_OPTIONS	altest	
CTL_OPTIONS	est_gff	transcripts_SRR1174239.gff3,transcripts_SRR190494.gff3,transcripts_SRR190495.gff3,transcripts_SRR190496.gff3,transcripts_SRR190497.gff3,transcripts_SRR190498.gff3,transcripts_SRR191838.gff3,transcripts_SRR191839.gff3,transcripts_SRR191840.gff3,transcripts_SRR191841.gff3,transcripts_SRR191842.gff3,transcripts_SRR341952.gff3,transcripts_SRR414982.gff3,transcripts_SRR414983.gff3,transcripts_SRR414984.gff3,transcripts_SRR414985.gff3,transcripts_SRR414986.gff3,transcripts_SRR414987.gff3,transcripts_SRR414988.gff3,transcripts_SRR414989.gff3
CTL_OPTIONS	altest_gff	
CTL_OPTIONS	protein	protfile.fasta
CTL_OPTIONS	protein_gff	
CTL_OPTIONS	model_org	all
CTL_OPTIONS	repeat_protein	te_proteins.fasta
CTL_OPTIONS	rmlib	allRepeats.lib
CTL_OPTIONS	rm_gff	
CTL_OPTIONS	organism_type	eukaryotic
CTL_OPTIONS	predictor	augustus,trnascan
CTL_OPTIONS	est2genome	0
CTL_OPTIONS	altest2genome	0
CTL_OPTIONS	snaphmm	
CTL_OPTIONS	gmhmm	
CTL_OPTIONS	augustus_species	datepalm
CTL_OPTIONS	fgenesh_par_file	
CTL_OPTIONS	model_gff	
CTL_OPTIONS	pred_gff	
CTL_OPTIONS	max_dna_len	100000
CTL_OPTIONS	split_hit	10000
CTL_OPTIONS	pred_flank	200
CTL_OPTIONS	pred_stats	1
CTL_OPTIONS	min_protein	0
CTL_OPTIONS	AED_threshold	1
CTL_OPTIONS	single_exon	0
CTL_OPTIONS	single_length	250
CTL_OPTIONS	keep_preds	0
CTL_OPTIONS	map_forward	0
CTL_OPTIONS	est_forward	0
CTL_OPTIONS	correct_est_fusion	0
CTL_OPTIONS	alt_splice	0
CTL_OPTIONS	always_complete	0
CTL_OPTIONS	alt_peptide	C
CTL_OPTIONS	evaluate	0
CTL_OPTIONS	blast_type	ncbi+
CTL_OPTIONS	softmask	0
CTL_OPTIONS	pcov_blastn	0.8
CTL_OPTIONS	pid_blastn	0.85
CTL_OPTIONS	eval_blastn	1e-10
CTL_OPTIONS	bit_blastn	40
CTL_OPTIONS	depth_blastn	0
CTL_OPTIONS	pcov_rm_blastx	0.5
CTL_OPTIONS	pid_rm_blastx	0.4
CTL_OPTIONS	eval_rm_blastx	1e-06
CTL_OPTIONS	bit_rm_blastx	30
CTL_OPTIONS	pcov_blastx	0.5
CTL_OPTIONS	pid_blastx	0.4
CTL_OPTIONS	depth_blastx	0
CTL_OPTIONS	eval_blastx	1e-06
CTL_OPTIONS	bit_blastx	30
CTL_OPTIONS	pcov_tblastx	0.8
CTL_OPTIONS	pid_tblastx	0.85
CTL_OPTIONS	eval_tblastx	1e-10
CTL_OPTIONS	bit_tblastx	40
CTL_OPTIONS	depth_tblastx	0
CTL_OPTIONS	ep_score_limit	20
CTL_OPTIONS	en_score_limit	20
CTL_OPTIONS	enable_fathom	0
CTL_OPTIONS	unmask	1
CTL_OPTIONS	model_pass	0
CTL_OPTIONS	est_pass	0
CTL_OPTIONS	altest_pass	0
CTL_OPTIONS	protein_pass	0
CTL_OPTIONS	rm_pass	0
CTL_OPTIONS	other_pass	0
CTL_OPTIONS	pred_pass	0
CTL_OPTIONS	run	augustus,trnascan
DIED	COUNT	2