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We’ve been using GAG (mentioned in this thread), though with some fiddling. I have heard that ENA has a much easier submission process.
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<div class="">chris</div>
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<div class="">On May 15, 2015, at 10:48 AM, Carson Holt <<a href="mailto:carsonhh@gmail.com" class="">carsonhh@gmail.com</a>> wrote:</div>
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<div class="">Here is an archived thread on this that might be useful as well —></div>
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<a href="https://groups.google.com/forum/#!searchin/maker-devel/genbank/maker-devel/qypkypBXVjs/aJACj38DpxMJ" class="">https://groups.google.com/forum/#!searchin/maker-devel/genbank/maker-devel/qypkypBXVjs/aJACj38DpxMJ</a>
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<div class="">—Carson</div>
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<div class="">On May 15, 2015, at 1:08 AM, Bert Brutzel <<a href="mailto:bertbrutzel@googlemail.com" class="">bertbrutzel@googlemail.com</a>> wrote:</div>
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<div class="">Dear All,<br class="">
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how to I reformat MAKER output to valid .tbl files for Genbank submission?<br class="">
I already tried quite some routes of formating the .gff to a .tbl (e.g. sed+awk+GAG....) but I simply run into to many problems? I as well tried to load the data into a chado, but this took over two weeks and exited with errors. Maybe someone who already submitted
their MAKER annotated genome to Genbank can help me...PLEASE.<br class="">
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Thank you very much,<br class="">
Bert<br class="">
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