<html><head><meta http-equiv="Content-Type" content="text/html charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class="">I toggled off and back on your digest option incase that is the issue.<div class=""><br class=""></div><div class="">The Mailman docs say that on busy days the digest option may decide to send out more than one digest, so that could be the issue too.</div><div class=""><br class=""></div><div class="">The company providing out mail list was having issues the last few weeks, so we weren’t able to approve most posts until yesterday. As a result, there was an explosion of approved posts that may have triggered the digest to be more than 1 per day yesterday and today.</div><div class=""><br class=""></div><div class="">—Carson</div><div class=""><br class=""></div><div class=""><br class=""></div><div class=""><br class=""><div><blockquote type="cite" class=""><div class="">On May 13, 2016, at 10:35 AM, David Price <<a href="mailto:dave.p.price@gmail.com" class="">dave.p.price@gmail.com</a>> wrote:</div><br class="Apple-interchange-newline"><div class=""><div dir="ltr" class="">would it be possible to get digest mode set up properly?<div class="">I have it selected but I get emails for each individual message.</div><div class=""><br class=""><div class="">Thanks</div></div></div><div class="gmail_extra"><br class=""><div class="gmail_quote">On Fri, May 13, 2016 at 10:27 AM, <span dir="ltr" class=""><<a href="mailto:maker-devel-request@yandell-lab.org" target="_blank" class="">maker-devel-request@yandell-lab.org</a>></span> wrote:<br class=""><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Send maker-devel mailing list submissions to<br class="">
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1. Re: Reformat maker gff3 (Michael Campbell)<br class="">
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Message: 1<br class="">
Date: Fri, 13 May 2016 11:34:00 -0400<br class="">
From: Michael Campbell <<a href="mailto:michael.s.campbell1@gmail.com" class="">michael.s.campbell1@gmail.com</a>><br class="">
To: Xabier V?zquez Campos <<a href="mailto:xvazquezc@gmail.com" class="">xvazquezc@gmail.com</a>><br class="">
Cc: Jenny Lee <<a href="mailto:h.lee12@uq.edu.au" class="">h.lee12@uq.edu.au</a>>, "<a href="mailto:maker-devel@yandell-lab.org" class="">maker-devel@yandell-lab.org</a>"<br class="">
<<a href="mailto:maker-devel@yandell-lab.org" class="">maker-devel@yandell-lab.org</a>><br class="">
Subject: Re: [maker-devel] Reformat maker gff3<br class="">
Message-ID: <<a href="mailto:777D8DFF-CB99-4F03-A4CF-8E52F0E4526A@gmail.com" class="">777D8DFF-CB99-4F03-A4CF-8E52F0E4526A@gmail.com</a>><br class="">
Content-Type: text/plain; charset="utf-8"<br class="">
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I?ve attached a protocols paper that walks through what you are trying to do. Let me know if it helps.<br class="">
Mike<br class="">
<br class="">
> On May 12, 2016, at 8:37 PM, Xabier V?zquez Campos <<a href="mailto:xvazquezc@gmail.com" class="">xvazquezc@gmail.com</a>> wrote:<br class="">
><br class="">
> Can't you filter the file content with the 'grep' command? If you need to extract columns, use 'cut' too<br class="">
><br class="">
> On 13 April 2016 at 13:05, Jenny Lee <<a href="mailto:h.lee12@uq.edu.au" class="">h.lee12@uq.edu.au</a> <mailto:<a href="mailto:h.lee12@uq.edu.au" class="">h.lee12@uq.edu.au</a>>> wrote:<br class="">
> Hi all,<br class="">
><br class="">
> I would like to update my maker gff3 file to only contain the genes I've decided to keep - all maker genes, a subset of abinitio genes (which have interproscan hits). I would like to also exclude the repeats information and only retain the CDS, gene, exon and mRNA - like the format we usually see in published data.<br class="">
><br class="">
> I've been trying to do this manually and it gets messy. Any ideas?<br class="">
><br class="">
> Thanks a lot.<br class="">
><br class="">
> Regards,<br class="">
> Jenny Lee<br class="">
><br class="">
><br class="">
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> --<br class="">
> Xabier V?zquez-Campos, PhD<br class="">
> Research Associate<br class="">
> Water Research Centre<br class="">
> School of Civil and Environmental Engineering<br class="">
> The University of New South Wales<br class="">
> Sydney NSW 2052 AUSTRALIA<br class="">
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