<html><head><meta http-equiv="Content-Type" content="text/html charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class=""><div class="">To get just AED without maker producing it’s own predictons, you must provide your models to model_gff in valid GFF3 format (gene/mRNA/exon/CDS multi-level features). Then supply any evidence to either est=, protein=, est_gff=, or protein_gff=.</div><div class=""><br class=""></div>The google location is just an archive. You cannot post there. All messages must be sent to the mailing list here —> <a href="http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org" class="">http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org</a><div class=""><br class=""></div><div class="">Thanks,</div><div class="">Carson</div><div class=""><br class=""><div class=""><br class=""><div><blockquote type="cite" class=""><div class="">On Apr 10, 2017, at 9:08 PM, <a href="mailto:wangzhennan@ioz.ac.cn" class="">wangzhennan@ioz.ac.cn</a> wrote:</div><br class="Apple-interchange-newline"><div class=""><p class="">Dear developer of Maker,</p><p class=""> I have used Maker to evaluate the genome annotation annotated by PASA. I have the transcript assembled by stringtie, genome (fasta), and the annotation file (gff3). How can I use the data to get the AED value from Maker? I have set the parameter of maker_opts.ctl. Can you help me to solve this? I only want to get the AED about the annotation file (gff3). Thank you very much!</p><p class=""> And there is also a question, I can not have a new post on <a href="https://groups.google.com/forum/#!forum/maker-devel" target="_blank" class="">https://groups.google.com/forum/#!forum/maker-devel</a>. Why? Can you help me to solve this? Thank you!</p><div class=""> <br class="webkit-block-placeholder"></div><p class=""> Best,</p><p class=""> Wangzhennan</p><p class=""> <br class=""><br class=""></p><span class=""></span><br class=""><br class=""><br class="">_______________________________________________<br class="">maker-devel mailing list<br class=""><a href="mailto:maker-devel@box290.bluehost.com" class="">maker-devel@box290.bluehost.com</a><br class="">http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org<br class=""></div></blockquote></div><br class=""></div></div></body></html>