<div dir="auto">Thanks! <div data-smartmail="gmail_signature">Nnadi Nnaemeka Emmanuel<br>Department of Microbiology,<br>Faculty of Natural and Applied Science,<br>Plateau State University, Bokkos, Plateau State, Nigeria.<br>Publications:  <a href="https://www.researchgate.net/profile/Emmanuel_Nnadi/publications">https://www.researchgate.net/profile/Emmanuel_Nnadi/publications</a><br><br>    </div></div><div class="gmail_extra"><br><div class="gmail_quote">On Oct 24, 2017 11:23 AM, "Martin MOKREJŠ" <<a href="mailto:mmokrejs@gmail.com">mmokrejs@gmail.com</a>> wrote:<br type="attribution"><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Hi Emmanuel,<br>
  use trimmomatic or cutadapt to remove the adapters and check the output file for unremoved cases. Once they are all removed redo the assembly.<br>
Martin<br>
<br>
Emmanuel Nnadi wrote:<br>
> Hello<br>
><br>
> Good day.<br>
><br>
> Please I submitted my sequence to NCBI and they sent back this contamination report.<br>
><br>
> Please how do I use maker to effect the correction<br>
<br>
--<br>
Martin Mokrejs, Ph.D.<br>
Adapter/artefact removal from datasets based on the following technologies:<br>
  454 / IonTorrent / Evrogen MINT / Clontech SMART / ..., Illumina<br>
<a href="http://www.bioinformatics.cz/software/supported-protocols/" rel="noreferrer" target="_blank">http://www.bioinformatics.cz/<wbr>software/supported-protocols/</a><br>
</blockquote></div></div>