<html><head><meta http-equiv="Content-Type" content="text/html; charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;" class="">The maker 3 beta is one of the links when you registre to download maker. IT will be the link directly under the stable release link —><div class=""><a href="http://yandell.topaz.genetics.utah.edu/cgi-bin/maker_license.cgi" class="">http://yandell.topaz.genetics.utah.edu/cgi-bin/maker_license.cgi</a></div><div class=""><br class=""></div><div class="">Also you can use grep to pull out specific lines of a gff3 file. Example:</div><div class=""> grep -P "\tprotein2genome\t" all.gff > protein2genome.gff</div><div class=""><br class=""></div><div class="">That command will grab all the protein2genome features out of a file.</div><div class=""><br class=""></div><div class="">—Carson</div><div class=""><br class=""><div class=""><div><br class=""><blockquote type="cite" class=""><div class="">On Oct 18, 2018, at 2:29 AM, Linnie Linnie <<a href="mailto:peachandolives@gmail.com" class="">peachandolives@gmail.com</a>> wrote:</div><br class="Apple-interchange-newline"><div class=""><div dir="ltr" class="">Dear maker team,<div class=""><br class=""></div><div class="">I am trying to run maker and use its input for EVM. From the EVM website, I gather that I need to provide it with .gff files. Maker2 does output one .gff, but I was wondering how to produce .gff files for the proteins and ETS data. </div><div class=""><br class=""></div><div class="">Alternatively, I have read that maker3 implements EVM. I would be happy to try this option, but I don't know where can I download maker3 from. </div><div class=""><br class=""></div><div class="">I would appreciate any help. Thank you very much!</div><div class=""><br class=""></div><div class="">Linnie</div><div class=""><br class=""></div></div>
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