<html>
<head>
<meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1">
<style type="text/css" style="display:none;"> P {margin-top:0;margin-bottom:0;} </style>
</head>
<body dir="ltr">
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);">
Hello!</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);">
<br>
</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);">
I hope I am contacting the correct email - I have been trying to install Maker for a few days now on my Mac OSX version 10.14 Mojave.</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);">
<br>
</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);">
It fails at the first few steps where it cannot install RepeatMasker, SNAP, or Exonerate. I have even tried to install these programs manually but Maker continues to fail to detect these packages or fails to install them properly. I did try using ./build package-name
as well but to no avail. I ran ./Build installexes and ./Build installdeps but they constantly fail for those three programs only and I cannot find a solution online.</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);">
<br>
</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);">
Could you provide me with the proper code to manually install these three programs so I can use Maker? I have checked online sources for these programs but then I run into the issue where configuring Maker does not seem to find these three programs if I install
it separately, so I am stuck at this step.</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);">
<br>
</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);">
Sorry for the long email I wanted to be explicit as I could be! </div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);">
<br>
</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);">
The error message I always get is:</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);">
<br>
</div>
<div style="">
<p style="color: rgb(206, 206, 206); font: 11px Menlo; margin: 0px;"><span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(0, 0, 0);">ERROR: Failed installing RepeatMasker, now cleaning installation path...</span></p>
<p style="color: rgb(206, 206, 206); font: 11px Menlo; margin: 0px;"><span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(0, 0, 0);">You may need to install RepeatMasker manually.</span></p>
<p style="color: rgb(206, 206, 206); font: 11px Menlo; margin: 0px; min-height: 13px;">
<span style="font-variant-ligatures: no-common-ligatures; font-variant-ligatures: no-common-ligatures"></span><br>
</p>
<p style="color: rgb(206, 206, 206); font: 11px Menlo; margin: 0px;"><span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(0, 0, 0);">Checking external program dependencies...</span></p>
<p style="color: rgb(206, 206, 206); font: 11px Menlo; margin: 0px;"><span style="font-variant-ligatures: no-common-ligatures; font-variant-ligatures: no-common-ligatures"><span style="background-color: rgb(0, 0, 0);">
</span></span><span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(0, 0, 0);">requires:</span></p>
<p style="color: rgb(206, 206, 206); font: 11px Menlo; margin: 0px;"><span style="font-variant-ligatures: no-common-ligatures; font-variant-ligatures: no-common-ligatures"><span style="background-color: rgb(0, 0, 0);">
</span></span><span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(0, 0, 0);">!</span><span style="font-variant-ligatures: no-common-ligatures; font-variant-ligatures: no-common-ligatures"><span style="background-color: rgb(0, 0, 0);">
</span></span><span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(0, 0, 0);">Exonerate is not installed</span></p>
<p style="color: rgb(206, 206, 206); font: 11px Menlo; margin: 0px;"><span style="font-variant-ligatures: no-common-ligatures; font-variant-ligatures: no-common-ligatures"><span style="background-color: rgb(0, 0, 0);">
</span></span><span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(0, 0, 0);">!</span><span style="font-variant-ligatures: no-common-ligatures; font-variant-ligatures: no-common-ligatures"><span style="background-color: rgb(0, 0, 0);">
</span></span><span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(0, 0, 0);">SNAP is not installed</span></p>
<p style="color: rgb(206, 206, 206); font: 11px Menlo; margin: 0px;"><span style="font-variant-ligatures: no-common-ligatures; font-variant-ligatures: no-common-ligatures"><span style="background-color: rgb(0, 0, 0);">
</span></span><span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(0, 0, 0);">!</span><span style="font-variant-ligatures: no-common-ligatures; font-variant-ligatures: no-common-ligatures"><span style="background-color: rgb(0, 0, 0);">
</span></span><span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(0, 0, 0);">RepeatMasker is not installed</span></p>
<p style="color: rgb(206, 206, 206); font: 11px Menlo; margin: 0px; min-height: 13px;">
<span style="font-variant-ligatures: no-common-ligatures; font-variant-ligatures: no-common-ligatures"></span><br>
</p>
<p style="color: rgb(206, 206, 206); font: 11px Menlo; margin: 0px;"><span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(0, 0, 0);">ERRORS/WARNINGS FOUND IN PREREQUISITES.</span><span style="font-variant-ligatures: no-common-ligatures; font-variant-ligatures: no-common-ligatures"><span style="background-color: rgb(0, 0, 0);">
</span></span><span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(0, 0, 0);">You may wish to install the programs</span></p>
<p style="color: rgb(206, 206, 206); font: 11px Menlo; margin: 0px;"><span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(0, 0, 0);">indicated above before proceeding with this installation.</span></p>
<p style="color: rgb(206, 206, 206); font: 11px Menlo; margin: 0px;"><span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(0, 0, 0);">Run 'Build installexes' to install missing prerequisites.</span></p>
<p style="color: rgb(206, 206, 206); font: 11px Menlo; margin: 0px;"><span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(0, 0, 0);"><br>
</span></p>
<p style="color: rgb(206, 206, 206); font: 11px Menlo; margin: 0px;"><span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(0, 0, 0);"><br>
</span></p>
<p style="font-style: normal; font-variant: normal; font-weight: normal; font-stretch: normal; line-height: normal; margin: 0px;">
<span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(255, 255, 255);"><font color="#000000" face="Calibri, Arial, Helvetica, sans-serif">Sincerely,</font></span></p>
<p style="font-style: normal; font-variant: normal; font-weight: normal; font-stretch: normal; line-height: normal; margin: 0px;">
<span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(255, 255, 255);"><font color="#000000" face="Calibri, Arial, Helvetica, sans-serif"><br>
</font></span></p>
<p style="font-style: normal; font-variant: normal; font-weight: normal; font-stretch: normal; line-height: normal; margin: 0px;">
<span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(255, 255, 255);"><font color="#000000" face="Calibri, Arial, Helvetica, sans-serif">Katherine Balasingham</font></span></p>
<p style="font-style: normal; font-variant: normal; font-weight: normal; font-stretch: normal; line-height: normal; margin: 0px;">
<br>
</p>
<p style="font-style: normal; font-variant: normal; font-weight: normal; font-stretch: normal; line-height: normal; margin: 0px;">
PS: I have never installed these programs before at all so I do not have older versions interfering with Maker. </p>
<br>
</div>
</body>
</html>