<div dir="ltr"><div dir="ltr"><div dir="ltr">Hi Carson<div><span style="color:rgb(0,0,0);font-family:-webkit-standard;font-size:medium">I want marker to output into a directory  /mnt/data/emmanuel/Makersupport. Please how can I make that?</span><br></div><div><span style="color:rgb(0,0,0);font-family:-webkit-standard;font-size:medium"><br></span></div><div><p style="margin:0px;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0)"><span style="font-variant-ligatures:no-common-ligatures">OPTS=/home/emmanuel/maker/bin</span></p>
<p style="margin:0px;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0)"><span style="font-variant-ligatures:no-common-ligatures">BOPTS=/home/emmanuel/maker/bin</span></p>
<p style="margin:0px;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0)"><span style="font-variant-ligatures:no-common-ligatures">EXE=/home/emmanuel/maker/bin</span></p>
<p style="margin:0px;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0)"><span style="font-variant-ligatures:no-common-ligatures">MAKER=/home/emmanuel/maker/bin</span></p>
<p style="margin:0px;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0)"><span style="font-variant-ligatures:no-common-ligatures">OUT=/mnt/data/emmanuel/Makersupport</span></p>
<p style="margin:0px;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0);min-height:13px"><span style="font-variant-ligatures:no-common-ligatures"></span><br></p>
<p style="margin:0px;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0)"><span style="font-variant-ligatures:no-common-ligatures">${MAKER}/maker  -cpus 26 ${OPTS}/maker_opts.ctl ${BOPTS}/maker_bopts.ctl ${EXE}/maker_exe.ctl</span></p>
<p style="margin:0px;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0);min-height:13px"><span style="font-variant-ligatures:no-common-ligatures"></span><br></p>
<p style="margin:0px;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0)"><span style="font-variant-ligatures:no-common-ligatures"></span></p>
<p style="margin:0px;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0);min-height:13px"><span style="font-variant-ligatures:no-common-ligatures"></span><br></p>
<p style="margin:0px;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0)"><span style="font-variant-ligatures:no-common-ligatures">Also,</span></p>
<p style="margin:0px;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0);min-height:13px"><span style="font-variant-ligatures:no-common-ligatures"></span><br></p>
<p style="margin:0px;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(252,50,32)"><span style="font-variant-ligatures:no-common-ligatures;color:rgb(0,0,0)">I added </span><span style="font-variant-ligatures:no-common-ligatures">RepBaseRepeatMaskerEdition-20170127.tar into the directory </span><span style="font-variant-ligatures:no-common-ligatures;color:rgb(0,0,0)">/home/emmanuel/maker/exe/RepeatMasker</span></p>
<p style="margin:0px;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0);min-height:13px"><span style="font-variant-ligatures:no-common-ligatures"></span><br></p>
<p style="margin:0px;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0)"><span style="font-variant-ligatures:no-common-ligatures">used tar xvf </span><span style="font-variant-ligatures:no-common-ligatures;color:rgb(252,50,32)">RepBaseRepeatMaskerEdition-20170127.tar to unpack it. In my </span><span style="font-variant-ligatures:no-common-ligatures">/home/emmanuel/maker/exe/RepeatMasker/Libraries I have RMRBSeqs.embl  but running maker it tells me it repbase is not installed.</span></p><div><div dir="ltr" class="gmail_signature"><div dir="ltr"><div><div dir="ltr">Nnadi Nnaemeka Emmanuel,Ph.D<div>Department of Microbiology,</div><div>Faculty of Natural and Applied Science,</div><div>Plateau State University, Bokkos, Plateau State, Nigeria.</div><div>+2348068124819</div><div>Publications: </div><div> <a href="https://www.researchgate.net/profile/Emmanuel_Nnadi/publications" target="_blank">https://www.researchgate.net/profile/Emmanuel_Nnadi/publications</a></div></div></div></div></div></div></div></div></div></div>