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<p>Hello,</p>
<p>I am running MAKER for 3 weeks on a large plant genome with a
significant evidence dataset, my job seems in appearance to be
running properly as it uses the allocated CPUs and the run folder
is actualized every minute. However, MAKER stopped writing in the
logfile after one day (in the middle of a step, see below). It is
actually the second time I have the problem, I killed a first time
the job as the logfile didn't change in a week and launched back
the annotation based on the previous run repository.<br>
<br>
A<span class="tlid-translation translation" lang="en"><span
title="" class="">s it has been three weeks since it runs
without visible result</span></span>s, would it be possible
that the process is running without making any progress? Is there
a way to assess the annotation state? <br>
</p>
<p>Logfile end:<br>
...<br>
total clusters:2 now processing 0<br>
...processing 0 of 3<br>
...processing 1 of 3<br>
...processing 2 of 3<br>
total clusters:2 now processing 0<br>
...processing 0 of 2<br>
...processing 1 of 2<br>
</p>
<p><br>
</p>
<p>Could you help me?<br>
</p>
<p><br>
Here are the logfiles of the two analysis: <a
class="moz-txt-link-freetext"
href="https://edc.ulg.ac.be/merci/maker_run_logs_4af3cd16577f3e870597_.zip">https://edc.ulg.ac.be/merci/maker_run_logs_4af3cd16577f3e870597_.zip</a></p>
<p><br>
Thank you for reading this message. <br>
<br>
Best regards,<br>
<br>
Loïc Meunier<br>
<br>
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