[maker-devel] Maker Behavior Options

[Daniel Ence]

Hi Parul, 

The "1" there actually means 1 bp. The default setting in maker is to allow contigs of any length. 


Thanks
Daniel 

Daniel Ence
Graduate Student
Eccles Institute of Human Genetics
University of Utah
15 North 2030 East, Room 2100
Salt Lake City, UT 84112-5330
________________________________________
From: maker-devel-bounces at yandell-lab.org [maker-devel-bounces at yandell-lab.org] on behalf of Parul Kudtarkar [parulk at caltech.edu]
Sent: Tuesday, December 04, 2012 5:39 PM
To: maker-devel at yandell-lab.org
Subject: [maker-devel] Maker Behavior Options

Hello,

I would presume min_contig=1 here is equal to contig size of 1KB?
min_contig=1

Thanks and regards,
Parul Kudtarkar

--
Scientific Programmer
Center for Computational Regulatory Genomics
Beckman Institute,
California Institute of Technology
http://www.spbase.org


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