[maker-devel] FW: maker error
Carson Holt
carsonhh at gmail.com
Sun Dec 9 12:16:53 MST 2012
The error is most likely one related to Berkley DB on some systems that
has been fixed in the devel version of maker. I've updated the maker
download at yandell-lab.org to version 2.27, so it also has the fix
integrated.
Thanks,
Carson
On 12-12-08 11:06 AM, "mark.rose at syngenta.com" <mark.rose at syngenta.com>
wrote:
>Hi
>
>I just installed maker and am trying to run it with the sample data but
>get the following error:
>
>$ maker
>STATUS: Parsing control files...
>WARNING: RepBase is not installed for RepeatMasker. This limits
>RepeatMasker's functionality and makes the model_org option in the
>control files virtually meaningless. MAKER will now reconfigure for
>simple repeat masking only.
>STATUS: Processing and indexing input FASTA files...
>Segmentation fault (core dumped)
>
>I've attached the config files and the output of $maker --debug
>
>Thanks for your help
>
>Mark
>
>
>
>
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