[maker-devel] CDS file?

[Carson Holt]

Use the fasta_tool script that comes with MAKER together with the
--trim_maker_utr option.

Thanks,
Carson



From:  Shane Brubaker <sbrubaker at solazyme.com>
Date:  Monday, 30 July, 2012 7:52 PM
To:  "maker-devel at yandell-lab.org" <maker-devel at yandell-lab.org>
Subject:  [maker-devel] CDS file?

Hi, does anyone know if maker outputs a file of just the CDS portion of
transcripts?  I want to use it to determine a codon usage table.
 
Thanks,
Shane
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