[maker-devel] question about augustus hints file
Jie
njauxiongjie at gmail.com
Fri Mar 2 19:38:50 MST 2012
Hi, all
I have aligned my EST to my genome and want to use the EST alignment
as hints of augustus. The command I run like your README file in
AUGUSTUS, and like bellow:
blat -minIdentity=92 genome.fa cdna.fa cdna.psl
blat2hints.pl --in=cdna.psl --out=hints.E.gff
but when I feed the hint file to augustus, it appeared some error like
bellow:
augustus: ERROR FeatureCollection::esource: invalid source key:
E
How can I solve this problem?
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