[maker-devel] maker gff3 to genbank tbl/gbk

[Carson Holt]

Try using Apollo.  You can open up GFF3 files and them save them as
GenBank format.  That might be sufficient.

Alternatively.  I've attached a script that can convert SNAP's ZFF format
to GeneBank.  You could then use the maker2zff that comes with MAKER to
convert results to ZFF and then this script to get GenBank format.

Thanks,
Carson

On 12-03-14 1:31 AM, "Joe Wilders" <joe.wilders at gmail.com> wrote:

>Dear MAKER experts,
>
>i hope that you can share your expertise regarding, conversion of
>maker gff3 to genbank tbl or gbk. im trying to produce a working
>genbank tbl, i tried converting to chado using maker2chado and
>gmodtools genbanksubmit writer. but so far it doesnt end well. most
>probably due to xml configuration(which im really loss, especially
>defining the "goldenpath") .is there any other way to produce the tbl
>from maker output?
>
>thanks :)
>
>Joe Wilders
>
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