[maker-devel] gff3_preds2models script

[Carson Holt]

The gff3_preds2models doesn't support the shared ID method for model
assembly.  You will need to create a parent match feature and child
match_part features (each with a unique ID and Parent= attribute).

You can find examples in the GFF3 specification here -->
http://www.sequenceontology.org/gff3.shtml

Thanks,
Carson


On 12-10-22 5:46 PM, "Parul Kudtarkar" <parulk at caltech.edu> wrote:

>Hello,
>
>I want to add gene structure(gene/mRNA/exon) to gff3 file. I am using
>gff3_preds2models for this purpose. However I get following error
>**WARNING: No top level feature found for ID WHL22.100252
>I have attached the sample input gff3 file and the list of ids
>
>Thanks and regards,
>Parul Kudtarkar
>
>--
>Scientific Programmer
>Center for Computational Regulatory Genomics
>Beckman Institute,
>California Institute of Technology
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