[maker-devel] maker annotate two species, same evidence, same settings

[Yunfei Guo]

Hi Carson,

I have a quick question about maker annotations. I want to annotate
two sets of assemblies from two related species using the same sets of
evidence and settings except that the est assemblies would be
specified as 'est' for one species (along with 'altest' evidence from
other species) and as 'altest' (combined with est evidence from other
species) for the other, would the annotation reflect the real
difference between these two species? Or there might be some
variations within the annotations themselves which might make the real
difference more or less significant?

Thank you!

Yunfei