[maker-devel] bioperl problem?

[Jacqueline R M Doyle]

Hello all,

We have MAKER installed on our supercomputing cluster, and I used it successfully this past summer.  I tried it again yesterday, and although MAKER appears to have finished annotating all the scaffolds (see attached datastore index) it seems to get stuck afterwards due to some kind of bioperl error and never actually finishes.  None of the "all.maker.transcripts.fasta","all.maker.snap_masked.proteins.fasta" files, etc. have been produced. Is the best answer to reinstall BioPerl?  Any other thoughts I can pass on to our IT guys?

Best wishes, Jackie  
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