[maker-devel] MAKER prediction- evidence weightage

Sivaranjani Namasivayam ranjani at uga.edu
Tue Feb 26 21:22:43 MST 2013


Hi,

Does MAKER give more weightage to certain type of evidence than others, that is, does it base its annotation more on EST, protein or ab-initio gene prediction? If so which one and is there a way to alter this.

Also, when I run MAKER I see the following in the error/log file

Can't locate package SDBM_File for @AnyDBM_File::ISA at /usr/local/perl/5.14.1/l
ib/5.14.1/x86_64-linux-thread-multi/DB_File.pm line 293.

Can you please tell me how this impacts the results.

Thanks,
Ranjani
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