[maker-devel] Help on MAKER

[Carson Holt]

When the "./Build " script is created then "./Build installexes" can be used
to get external executables and "./Build installdeps" can be used to get
perl prerequisite modules.

Thanks,
Carson

From:  Daniel Ence <dence at genetics.utah.edu>
Date:  Monday, 11 February, 2013 11:23 AM
To:  "maker-devel at yandell-lab.org" <maker-devel at yandell-lab.org>
Cc:  Hud Hud <hudarul at yahoo.com>
Subject:  Re: [maker-devel] Help on MAKER

Hi Huda, 

So, the basic process of install maker is as follows:

1) Download and extract the tgz make file.
2) Go to the "src" directory.
3) Run the command "perl Build.PL". (also its helpful, probably necessary,
to have sudo permissions on the machine that you're install
4) This will run some configuration steps for maker and will create a perl
script call "Build" (this is different from perl Build.PL).
    The remaining installation steps will run through this new Build script.
5) Run the command "./Build status" This will give you a report of what
prerequisite programs and perl modules the Build scripts were able to find
along with a list of commands for installing the various prereqs that you
mentioned.

If you have any more questions, please reply to the maker-devel.

Thanks,
Daniel


Daniel Ence
Graduate Student
Eccles Institute of Human Genetics
University of Utah
15 North 2030 East, Room 2100
Salt Lake City, UT 84112-5330

From: Hud Hud [hudarul at yahoo.com]
Sent: Sunday, February 10, 2013 6:38 PM
To: Daniel Ence
Subject: Help on MAKER

Hello Hi, Im Huda...Im having problem during the installation of MAKER...I'm
not sure whether im asking the right person, I just pick anyone from the
list of Yandell People page...Hofefully im not troubling u with this
email...
Back to the problem...I try to install Maker but I've noticed that im
missing some external program that are Blast and SNAP...how to solve this
problem. FYI im very new in this field and not very familiar with
programming or scripting. Im using cygwin. Thanks for your help
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