[maker-devel] perl

Joanna Kelley jokelley at stanford.edu
Tue Feb 26 22:53:52 MST 2013


Hi Carson,

First, I just learned the term shebang line, that's awesome!
Second, what you said isn't the case, because I ran;

[jokelley at scg3-ln01 src ]$ /opt/perl/bin/perl Build.PL
[jokelley at scg3-ln01 src ]$ grep "/usr/bin/perl" */*
...
bin/maker:#!/usr/bin/perl
bin/maker2chado:#!/usr/bin/perl
bin/maker2eval_gtf:#!/usr/bin/perl
bin/maker2jbrowse:#!/usr/bin/perl
...

So it's not using the /opt/perl/bin/perl

any other ideas for changing that?
Because it's not working.

On Tue, Feb 26, 2013 at 5:47 PM, Carson Holt <carsonhh at gmail.com> wrote:

> The shebang line (#!) should use whatever perl was used in the "perl
> Build.PL" step of the configuration.  Then "Build install" will overwrite
> the existing scripts with the ones using a different perl.
>
> --Carson
>
>
> From: Joanna Kelley <jokelley at stanford.edu>
> Date: Tuesday, 26 February, 2013 5:11 PM
> To: <maker-devel at yandell-lab.org>
> Subject: [maker-devel] perl
>
> Hello,
>
> Is there an easy way to change the
> hard coding of #!/usr/bin/perl
> to another perl location in the
> configuration / installation of maker?
>
> Thanks,
> Joanna
>
>
>
> --
> Joanna L. Kelley, PhD
> Department of Genetics
> Stanford School of Medicine
> 300 Pasteur Drive
> Lane Building, Room L-333
> Stanford, CA 94305-5120
> jokelley at stanford.edu
>
> _______________________________________________ maker-devel mailing list
> maker-devel at box290.bluehost.com
> http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org
>



-- 
Joanna L. Kelley, PhD
Department of Genetics
Stanford School of Medicine
300 Pasteur Drive
Lane Building, Room L-333
Stanford, CA 94305-5120
jokelley at stanford.edu
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