[maker-devel] Maker-no such file or directory

[Carson Holt]

Does 'ls -al $home/Dorah/maker-2.27-beta/maker/data/dpp_contig.fasta'  show
a valid location?
The error is just saying that the file location as written in the
maker_opts.ctl file does not exist.

--Carson


From:  Hud Hud <hudarul at yahoo.com>
Reply-To:  Hud Hud <hudarul at yahoo.com>
Date:  Monday, 18 March, 2013 4:13 PM
To:  "maker-devel at yandell-lab.org" <maker-devel at yandell-lab.org>
Subject:  [maker-devel] Maker-no such file or directory

I have some problem with maker
1. i try to work with the example data in data directory, but im having this
kind of error..anyone can help me

error
$ maker
STATUS: Parsing control files...
dpp_contig.fasta (fasta file or fasta embeded in GFF3 file): No such file or
directory at /home/Dorah/maker-2.27-beta/maker/bin/../lib/GI.pm line 186
--> rank=NA, hostname=NurKaiyisah

my maker_opts.ctl
genome=$home/Dorah/maker-2.27-beta/maker/data/dpp_contig.fasta
est=$home/Dorah/maker-2.27-beta/maker/data/dpp_est.fasta
protein=$home/Dorah/maker-2.27-beta/maker/data/dpp_protein.fasta
_______________________________________________ maker-devel mailing list
maker-devel at box290.bluehost.com
http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://yandell-lab.org/pipermail/maker-devel_yandell-lab.org/attachments/20130318/63aea0d3/attachment-0001.html>