[maker-devel] Can MAKER analyze the viral genome?

[Carson Holt]

You can set organism type to prokaryotic and use the protein2genome option
for annotation.  It's not a perfect match as it only allows for partial gene
spatial overlap and not full gene within a gene like you can see in viruses.

Thanks,
Carson



From:  Hung-Wei Hsu <ares711122 at gmail.com>
Date:  Friday, 22 March, 2013 3:52 AM
To:  <maker-devel at yandell-lab.org>
Subject:  [maker-devel] Can MAKER analyze the viral genome?

Hi MAKER developers,

I'm wondering if MAKER can deal with the viral genome.
If yes, how do I set the running parameters?
Thanks.

Kind regards,
Hung-Wei
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