[maker-devel] ./FINISHED/FINISHED.gff

[Yunfei Guo]

Hi Carson,

When I tried to merge all gff files, I got this error:

ERROR: The file './FINISHED/FINISHED.gff' does not exist

and I found something like below in master_datastore_index.log. Is this
caused by the duplicate scaffold?

C12919781       GapCloser-Nigro-Min1k_datastore/28/79/C12919781/
 FINISHED
        FINISHED
scaffold138015  GapCloser-Nigro-Min1k_datastore/F7/0C/scaffold138015/
FINISHED


FASTA lines for C12919781  and scaffold138015

>C12919781 36.0
>C12919781 36.0
CGTAAATGCATCCGCGTATAAATGCGACAGTAAGAGTTAATGATGCAGTATAAAAAGCAAGAAAAAGCGTTTATGGTGGGAGGCGGAGGCATCCAACTAACACCAGACTGTTAACCCGGAGACCAGTGGTCGACACCGTCG(skip...)
>scaffold138015 35.1
ATATGCATATGCATATGCATATGCATATGCATATGCATATATAGACATGTAGATATAGACATCAATCATACACGTAACCCATCATTCGTATTATTAAATCACATTTTGTGACTTTGCCCATCTGTCTTTAAAGGGACAATGTGTATG(skip...)

maker 2.27

Thanks,
Yunfei
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