[maker-devel] symbol lookup error: /usr/local/lib/libmpich.so.10: undefined symbol: MPIU_Strncpy

[Carson Holt]

You have to use MPICH2, the new MPICH3 is not compatible.  MPI version 3 is
a completely new protocol implemented in MPICH3, and it breaks MAKER.  You
can also use OpenMPI with the MAKER version 2.27.

Thanks,
Carson


From:  Rob Syme <rob.syme at gmail.com>
Date:  Tuesday, 14 May, 2013 2:54 AM
To:  <maker-devel at yandell-lab.org>
Subject:  [maker-devel] symbol lookup error: /usr/local/lib/libmpich.so.10:
undefined symbol: MPIU_Strncpy

Hi all

I'm trying to get mpi_maker up and running.

I've installed the latest version of MPICH from
mpich.org/static/downloads/3.0.4/mpich-3.0.4.tar.gz
<http://mpich.org/static/downloads/3.0.4/mpich-3.0.4.tar.gz> , making sure
to "./configure --enable-shared"

Everything seems to install without trouble, but running

    mpiexec -n 1 mpi_maker <ctl files>

gives:

    /usr/bin/perl: symbol lookup error: /usr/local/lib/libmpich.so.10:
undefined symbol: MPIU_Strncpy


Does anybody here know how to fix this? Do I need to downgrade to an older
version of MPICH?

Thanks!


Rob Syme
PhD Student
Curtin University
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