[maker-devel] Maker MPICH2 issue (Multiple MAKER processes have been started in the same directory)
Marc P. Hoeppner
marc.hoeppner at imbim.uu.se
Fri Oct 25 08:20:04 MDT 2013
Dear list,
I know that MPICH2 related issues have been discussed previously, but
the suggested solutions don't seem to work for me.
Briefly, I have set up a new cluster, with a fresh install of mpich2 (SL
6.4, from the yum repos) and a newly compiled build of Maker 2.28.
When I start maker with mpiexec, I get spammed with
'WARNING: Multiple MAKER processes have been started in the same
directory.'
Here is what I have tried so far - still getting the error :-< Any
suggestions would be appreciated
--------
MPICH2
---------
which mpiexec:
/usr/lib64/mpich2/bin/mpiexec
Started the mpd ring as normal user across 5 nodes (bnode-01 to
bnode-04, and the head node bhead)
mpdtrace:
bhead
bnode-02
bnode-03
bnode-04
bnode-01
mpdringtest:
time for 1 loops = 0.00128293037415 seconds
mpixec -n 32 -machinefile hostfile hostname:
<long list of host names, as ecpected>
I also ran the Skampi Mpi Benchmark, which ran through just fine.
-----------
MAKER
-----------
./Build status
PERL Dependencies: VERIFIED
External Programs: VERIFIED
External C Libraries: VERIFIED
MPI SUPPORT: ENABLED
MWAS Web Interface: DISABLED
MAKER PACKAGE: CONFIGURATION OK
During configuration/installation, Build.PL automatically detected all
MPI data and never complained, so I have to assume that everything went
fine there.
--
----------
Marc P. Hoeppner, PhD
Department of Microbiology and Medical Biochemistry
Uppsala University, Sweden
marc.hoeppner at imbim.uu.se
More information about the maker-devel
mailing list