[maker-devel] Installing Maker on Cray

[Fields, Christopher J]

We might be interested in that ourselves at some point:

https://bluewaters.ncsa.illinois.edu

chris

On Apr 1, 2014, at 11:11 AM, Matthew MacManes <matthew.macmanes at unh.edu<mailto:matthew.macmanes at unh.edu>> wrote:

Hi Carson and list:

I tried that - we'll see if it works. I'm hung up on Perl dependencies right now - the Craycc compiler is not happy with several of them (forks, to name one).

If anybody has installed Maker on a Cray, please contact me!

Thanks, Matt

__________________________________
Matthew MacManes, Ph.D.
University of New Hampshire  I  Assistant Professor
Department of Molecular, Cellular, & Biomedical Sciences
Durham, NH  03824
Phone: 603-862-4052  I  Twitter: @PeroMHC<https://twitter.com/PeroMHC>
Web: genomebio.org<http://genomebio.org/>
Office: 189 Rudman Hall I Lab: 145 Rudman Hall


On Tue, Apr 1, 2014 at 8:58 AM, Carson Holt <carson.holt at icloud.com<mailto:carson.holt at icloud.com>> wrote:
Create a soft link called mpicc.  I can't guarantee shared libraries are installed on you system though as not all system derived versions of MPICH2 have been configured with shared libraries.

--Carson



Sent from my iPhone

On Apr 1, 2014, at 5:23 AM, Matthew MacManes <matthew.macmanes at unh.edu<mailto:matthew.macmanes at unh.edu>> wrote:

Hello,

I am trying to install the MPI version of Maker on our Cray supercomputer: http://trillian-use.sr.unh.edu/index.php/Main_Page

Cray has MPICH2, but not the compilers mpicc and mpicxx. Cray has it's own proprietary compilers mpicc=cc and mpicxx=CC

When running the 1st step in src 'perl Build.pl', it asks me for the location of mpicc - I can give the full path to Cray equivalent cc, but it is not recognized. Many other programs allow me to specify the c compiler, e.g, './configure mpicc=cc', but I cannot seem to do this with Maker.

Any advice?

Thanks, Matt

__________________________________
Matthew MacManes, Ph.D.
University of New Hampshire  I  Assistant Professor
Department of Molecular, Cellular, & Biomedical Sciences
Durham, NH  03824
Phone: 603-862-4052<tel:603-862-4052>  I  Twitter: @PeroMHC<https://twitter.com/PeroMHC>
Web: genomebio.org<http://genomebio.org/>
Office: 189 Rudman Hall I Lab: 145 Rudman Hall

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