[maker-devel] NCBI feature table

UMD Bioinformatics bioinformatics.umd at gmail.com
Fri Feb 7 06:29:27 MST 2014


Hello Maker Developers,

I have used this software with great success and I continue to look to it going forward. However, as I’m getting ready to submit my annotations to NCBI with the genomes I haven’t found a straightforward method of turning the MAKER produced GFF files into a NCBI feature table. What is the process for creating this table? It seem that the format NCBI is looking for is unique and I haven’t uncovered any scripts or tools to assist in the creation of this table from my annotation files. If anyone has any insight on this issue it would be greatly appreciated.

Cheers
Ian





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