[maker-devel] error in snap training

Rebecca Harris rbharris at uw.edu
Tue Feb 25 14:49:57 MST 2014


Hey -

I'm trying to train SNAP and am running into errors. I don't have any EST
evidence, just protein. My .gff file reports 10865 genes but when I run
maker2zff  -c0 -e0 I get back empty genome files. When I run maker2zff -n,
a ton of overlap_prev_exon errors get written to the screen and then with I
get to the forge step I get an "impossible error5". Any help would be
greatly appreciated.

Thanks!
Rebecca
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