[maker-devel] ncRNA support in maker

[Carson Holt]

Hi Mikael,

The options are part of the new MAKER-P integration
(http://www.plantphysiol.org/content/early/2013/12/06/pp.113.230144.abstrac
t).  Additional documentation/tutorials will be forthcoming - probably in
a nice wiki page as part of the upcoming GMOD Malaysia courses in February
or alternatively with the annual GMOD summer school. The tRNA option is
easy enough to turn on (just set trna=1 in the maker_opts.ctl file).

Thanks,
Carson



On 1/10/14, 2:48 AM, "Mikael Brandström Durling" <mikael.durling at slu.se>
wrote:

>Hi Carson and other maker developers,
>
>I was reading the source code of the latest maker release and noted
>several references to ncRNAs, snoscan and trnascan. Can these be
>incorporated into the normal annotation workflow? If so, are there any
>instructions available for that?
>
>best regards,
>Mikael Durling
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