[maker-devel] AED scores and thresholds: Not filtering?

[Jan Philip Øyen]

Hello,
We are currently working on annotating arthropod genomes with the maker
pipeline. We have tried to filter out genes with low support using the AED
thresholds using AED_threshold=0.5. However, we still find genes without
scores and most importantly genes with scores above the set threshold (even
AED=1). Is there a known issue which could cause this?

We can supply the control files as well as gffs, but would not like to make
them public at this stage.

Best Regards,
Jan Philip Oeyen
ZFMK / ZMB / University of Bonn
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