[maker-devel] Fwd: iprscan2gff3
Rebecca Harris
rbharris at uw.edu
Thu Jun 19 13:07:36 MDT 2014
Hi,
I'm trying to use the iprscan2gff3 script to update my final gff3 file with
annotations from Interproscan 5. I'm getting a bunch of errors similar to
another user but do not see how their issue was resolved:
https://groups.google.com/forum/#!searchin/maker-devel/iprscan2gff3/maker-devel/MykTxL2Da64/5yrO3e6WBHUJ
I ran Interproscan on my ab initio predictions, then converted the xml to
raw format. When I run iprscan2gff3 I get the errors:
Use of uninitialized value $name in hash element at
/gscratch/leache/rbharris/maker/bin/ipr_update_gff line 107, <$IN> line
1090.
Thanks,
Rebecca
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