[maker-devel] Segmenation Error

[Atkins, Jacqueline (NIH/NIAID) [C]]

Hi Everyone,

I have a user who is reporting a segmentation error.. I am not really even sure where to start.  Not sure if this is related to config issues or the way in which the software is being executed.  Any advice would be greatly appreciated.

Here is the command

mpiexec -n 50 maker maker_opts_run1.ctl maker_bopts.ctl maker_exe.ctl

--Next Contig--

examining contents of the fasta file and run log
examining contents of the fasta file and run log
[ai-hpcn063:99111] *** Process received signal ***
[ai-hpcn063:99111] Signal: Segmentation fault (11)
[ai-hpcn063:99111] Signal code: Address not mapped (1)
[ai-hpcn063:99111] Failing at address: (nil)
examining contents of the fasta file and run log
[ai-hpcn053:119610] *** Process received signal ***
[ai-hpcn053:119610] Signal: Segmentation fault (11)
[ai-hpcn053:119610] Signal code: Address not mapped (1)
[ai-hpcn053:119610] Failing at address: (nil)
[ai-hpcn053:119610] [ 0] /lib64/libc.so.6(+0x35a00)[0x2aaaab85ca00]
[ai-hpcn053:119610] *** End of error message ***
examining contents of the fasta file and run log
examining contents of the fasta file and run log
examining contents of the fasta file and run log
examining contents of the fasta file and run log
examining contents of the fasta file and run log
[ai-hpcn063:99111] [ 0] /lib64/libc.so.6(+0x35a00)[0x2aaaab85ca00]
[ai-hpcn063:99111] *** End of error message ***
examining contents of the fasta file and run log
examining contents of the fasta file and run log
examining contents of the fasta file and run log
examining contents of the fasta file and run log
examining contents of the fasta file and run log
examining contents of the fasta file and run log
examining contents of the fasta file and run log
examining contents of the fasta file and run log
examining contents of the fasta file and run log
examining contents of the fasta file and run log
examining contents of the fasta file and run log




___________________________________________
Jacqueline Atkins, Contractor
Sr. HPC Engineer
National Institute of Allergy and Infectious Diseases
SRA International Inc., A CSRA Company
office 301-451-9644, mobile 301-767- 7110
5601 Fishers Lane, 6A60, Bethesda, MD 20852
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