[maker-devel] Reformat maker gff3

Jenny Lee h.lee12 at uq.edu.au
Tue Apr 12 21:05:12 MDT 2016


Hi all,


I would like to update my maker gff3 file to only contain the genes I've decided to keep - all maker genes, a subset of abinitio genes (which have interproscan hits). I would like to also exclude the repeats information and only retain the CDS, gene, exon and mRNA - like the format we usually see in published data.


I've been trying to do this manually and it gets messy. Any ideas?


Thanks a lot.


Regards,

Jenny Lee

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