[maker-devel] Maker example data for 2013 GMOD summer school

[Qihua Liang]

Hi, Daniel

I am using Maker to annotate cowpea genome for a while but now I am wondering if I could use multi-threads instead of single one? It has been running tblastx for such a long time using single thread. But I couldn’t find such settings in documentations to assign multi-threads to run Maker. Is there such an option?

Thank you 
Qihua


> On Mar 30, 2016, at 2:17 PM, Daniel Ence <dence at genetics.utah.edu> wrote:
> 
> HI Qihua, 
> 
> I believe that most of the data we used in the tutorials are are available in the maker/data directory, which is included in all maker distributions. Please let me know if that isn’t the case. 
> 
> ~Daniel
> 
> 
> Daniel Ence
> Graduate Student
> Eccles Institute of Human Genetics
> University of Utah
> 15 North 2030 East, Room 2100
> Salt Lake City, UT 84112-5330
> 
>> On Mar 30, 2016, at 3:10 PM, Qihua Liang <qlian003 at ucr.edu> wrote:
>> 
>> Hi Michael and Daniel,
>> 
>> I am a graduate student in UC Riverside, and recently I am learning to use Maker for genome annotation. I was trying to find some tutorials to follow and practice on example data, and I found out that you were giving a talk on Maker during 2013 GMOD summer school and the tutorial of that is very detailed. Nice job!
>> 
>> But example data under the folder you mentioned as ./maker/maker_course is not provided on the website and I am wondering if they are available to the public or not. If yes, could you send me those materials so that I could follow your tutorial to practice using Maker?
>> 
>> Thank you
>> Best
>> Qihua
>