[maker-devel] MPI test

[sebastien.moretti at unil.ch]

OK, I removed execution rights for mpi_evaluator.

I tried mpiexec -n 10 maker
MPI tries to write in the maker/perl/ directory.
This is an issue for me because maker is installed in a read-only file
system.

Is there an option or something to tell MPI to write elsewhere?

Sébastien

> To run MAKER with MPI, you just call maker with mpiexec. Examples can be found on the MAKER wiki, in the devel list archives, and in the README/INSTALL guide.
> 
> Basically something like this to run on 10 CPUs —> mpiexec -n 10 maker
> 
> Any other MPI options will depend on the flavor of MPI you use, and your cluster settings.
> 
> —Carson
> 
> 
> 
>> On Aug 2, 2016, at 6:00 AM, Sebastien Moretti <sebastien.moretti at unil.ch> wrote:
>>
>> Hi
>>
>> I compiled maker with MPI support and would like to test it.
>> So I tried to run mpi_evaluator but it fails because Parallel/MPIcar.pm
>> is missing.
>>
>> What does mpi_evaluator do?
>> How to test properly MPI in maker?
>>
>> maker 2.31.8, Linux x86_64 2.6.32, Perl 5.18.2
>> openmpi 1.8.1
>>
>> Regards

--
Sébastien Moretti
Staff Scientist
SIB Vital-IT EMBnet, Quartier Sorge - Genopode
CH-1015 Lausanne, Switzerland
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