[maker-devel] running MAKER to merge annotations
Arun Seetharam
arnstrm at gmail.com
Fri Jan 1 11:31:06 MST 2016
Hi all,
First of all, a very happy new year to all of you! I hope everyone is
having a great holiday season.
I have a question about Maker. For my grass species, I ran 3 separate
rounds of MAKER (low GC, regular GC and high GC) and I now have 3 maker gff
files. So, what is the correct way to merge these files to a single gff
file? Do I have to run a maker round with just the GFF files as input? It
looks like EVM especially meant to do this kind of job, but not sure if
Maker does this too.
Thanks for any help or suggestions!
Have a nice day,
--
Arun Seetharam
Post Doctoral Research Associate
Genome Informatics Facility & EEOB
Office of Biotechnology
228 Science I
Iowa State University
Ames, Iowa 50011
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