[maker-devel] Question about Maker2

José Mª G. Perez-Silva ereboperezsilva at gmail.com
Thu Mar 31 06:57:47 MDT 2016


​​
Hello,

We are using Maker for the first time, and we are a little concerned about
the time it takes the program to finish a whole genome (2.2Gb) ab-initio
annotation.

In a month we have nearly annotate a half of the genome (let's say around
40% of it).
I'd like to know how much time and under which technical specifications
(processors, memory, ...) does it takes to annotate a complete genome for
the first time.
The second round of annotations (in which we use the results from the first
round as extra data) is faster?

Thank you in advance.

---

Jose Maria G. Perez-Silva.
Departamento de Biologia Molecular y Bioquimica.
Universidad de Oviedo.
Spain.
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