[maker-devel] Maker not installing

Carson Holt carsonhh at gmail.com
Mon Aug 28 11:36:51 MDT 2017


Path needs to be a list of directories to search (you specified an executable location).

So not this —> /Users/emmannaemeka/Desktop/Gpm/maker/bin/maker

Instead it needs to be this —> /Users/emmannaemeka/Desktop/Gpm/maker/bin

—Carson


> On Aug 28, 2017, at 11:32 AM, Emmanuel Nnadi <eennadi at gmail.com>
> wrote:
> 
> Thanks 
> 
> I tried to export PATH
> 
> running 
> echo $PATH in the maker directory this returned
> 
> /usr/bin:/bin:/usr/sbin:/sbin:/opt/X11/bin:/Users/emmannaemeka/Desktop/Gpm/maker/bin/maker
> 
> 1. Does it mean that PATH has been exported?
> 
> 
> secondly,
> 
> I tried to run
> the command maker -h, which maker, maker -CTL
> 
> nothing returned.
> 
> 2. how do i start up maker?
> 3. Do I need to be in maker directory to start maker?
> 
> Thanks
> 
> 
> 
> 
> 
> Nnadi Nnaemeka Emmanuel
> Department of Microbiology,
> Faculty of Natural and Applied Science,
> Plateau State University, Bokkos, Plateau State, Nigeria.
> Publications:  https://www.researchgate.net/profile/Emmanuel_Nnadi/publications <https://www.researchgate.net/profile/Emmanuel_Nnadi/publications>
> On Mon, Aug 28, 2017 at 4:49 PM, Carson Holt <carsonhh at gmail.com <mailto:carsonhh at gmail.com>> wrote:
> After install the executables will be in the …/maker/bin directory. Example (if you did the install in your home directory) —> ~/maker/bin/maker
> 
> You need to add the …/maker/bin directory to your PATH for it to be found just by typing ‘maker'
> 
> Explanation of the Linux PATH —> http://www.linfo.org/path_env_var.html <http://www.linfo.org/path_env_var.html>
> 
> —Carson
> 
> 
>> On Aug 28, 2017, at 8:07 AM, Ence,daniel <d.ence at ufl.edu <mailto:d.ence at ufl.edu>> wrote:
>> 
>> Sorry I should have typed “maker -CTL”. If that doesn’t work, what is the result of “which maker”? 
>> 
>> 
>> 
>>> On Aug 28, 2017, at 10:00 AM, Emmanuel Nnadi <eennadi at gmail.com <mailto:eennadi at gmail.com>> wrote:
>>> 
>>> Hi Daniel
>>> The reply is 
>>> emmannamekasMBP:maker emmannaemeka$ MAKER -ctl
>>> -bash: MAKER: command not found
>>> 
>>> Nnadi Nnaemeka Emmanuel
>>> Department of Microbiology,
>>> Faculty of Natural and Applied Science,
>>> Plateau State University, Bokkos, Plateau State, Nigeria.
>>> Publications:  https://www.researchgate.net/profile/Emmanuel_Nnadi/publications <https://www.researchgate.net/profile/Emmanuel_Nnadi/publications>
>>> On Mon, Aug 28, 2017 at 2:57 PM, Ence,daniel <d.ence at ufl.edu <mailto:d.ence at ufl.edu>> wrote:
>>> Hi, It looks like MAKER installed ok. What is the command that you used to try to run MAKER? Can you show the result of running “MAKER -ctl”? 
>>> 
>>> Thanks,
>>> Daniel Ence
>>> 
>>> 
>>>> On Aug 28, 2017, at 9:24 AM, Emmanuel Nnadi <eennadi at gmail.com <mailto:eennadi at gmail.com>> wrote:
>>>> 
>>>> Hi Ence,
>>>> Thanks for your reply,
>>>> 
>>>> This is the step and error received
>>>> emmannamekasMBP:src emmannaemeka$ ./build install
>>>> Installing MAKER...
>>>> Building MAKER
>>>> Skip /Users/emmannaemeka/desktop/Gpm/maker/src/../perl/config-darwin-thread-multi-2level-5.018002 (unchanged)
>>>> 
>>>> The build status is
>>>> 
>>>> =============================================================================
>>>> STATUS MAKER v2.31.9
>>>> ==============================================================================
>>>> PERL Dependencies:  VERIFIED
>>>> External Programs:  VERIFIED
>>>> External C Libraries:   VERIFIED
>>>> MPI SUPPORT:        DISABLED
>>>> MWAS Web Interface: DISABLED
>>>> MAKER PACKAGE:      CONFIGURATION OK
>>>> 
>>>> Nnadi Nnaemeka Emmanuel
>>>> Department of Microbiology,
>>>> Faculty of Natural and Applied Science,
>>>> Plateau State University, Bokkos, Plateau State, Nigeria.
>>>> Publications:  https://www.researchgate.net/profile/Emmanuel_Nnadi/publications <https://www.researchgate.net/profile/Emmanuel_Nnadi/publications>
>>>> On Mon, Aug 28, 2017 at 2:00 PM, Ence,daniel <d.ence at ufl.edu <mailto:d.ence at ufl.edu>> wrote:
>>>> Hi Emmanuel, In order for anyone to help you, you need post to the mailing list the command and output (including errors) of the step that didn’t work. 
>>>> 
>>>> Thanks,
>>>> Daniel Ence
>>>> 
>>>> 
>>>>> On Aug 27, 2017, at 10:16 AM, Emmanuel Nnadi <eennadi at gmail.com <mailto:eennadi at gmail.com>> wrote:
>>>>> 
>>>>> Hello all,
>>>>> 
>>>>> I downloaded Maker and tried to install it. I succeeded in installing all prerequisites however running maker ./build install, it showed that maker installed.
>>>>> 
>>>>> However trying to run maker it wouldn't run.
>>>>> 
>>>>> Please how do I install maker to run on local computer?
>>>>> 
>>>>> Thanks
>>>>> 
>>>>> Nnadi Nnaemeka Emmanuel
>>>>> Department of Microbiology,
>>>>> Faculty of Natural and Applied Science,
>>>>> Plateau State University, Bokkos, Plateau State, Nigeria.
>>>>> Publications:  https://www.researchgate.net/profile/Emmanuel_Nnadi/publications <https://www.researchgate.net/profile/Emmanuel_Nnadi/publications>
>>>>> 
>>>>>    
>>>>> _______________________________________________
>>>>> maker-devel mailing list
>>>>> maker-devel at box290.bluehost.com <mailto:maker-devel at box290.bluehost.com>
>>>>> http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org <http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org>
>>>> 
>>>> 
>>> 
>>> 
>> 
>> _______________________________________________
>> maker-devel mailing list
>> maker-devel at box290.bluehost.com <mailto:maker-devel at box290.bluehost.com>
>> http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org <http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org>
> 
> 

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://yandell-lab.org/pipermail/maker-devel_yandell-lab.org/attachments/20170828/9fc1e91d/attachment-0003.html>


More information about the maker-devel mailing list