[maker-devel] Request a favor regarding MAKER

Carson Holt carson.holt at genetics.utah.edu
Thu Jun 22 22:31:58 MDT 2017


Sorry for the slow reply. This message somehow got overlooked. The lock is referring to a file lock. It usually means there is another active MAKER process that is trying to run in the same directory as your current maker process. This may mean you may have problems with the MPI setup if using MAKER under MPI. Or if you started MAKER multiple times simultaneously, then you got a collision when both are trying to work with the same data. Just kill all active MAKER processes and restart if that is the case.  If it’s an MPI issue run maker with the -h flag added to the the current MPI command you are using to run MAKER. If it prints the help message more than once, then the MPI communication ring is having an issue. This could be a problem with how you installed MAKER or how you installed MPI.

--Carson




> On Jun 9, 2017, at 2:39 AM, shaf <shaf.s202 at gmail.com> wrote:
> 
> Greetings,
> My name is Shaf and currently I'm using MAKER for my data. I did managed get some result using MAKER but i have problem with my storage.
> 
> So I tried run maker on other directory with big space .
> As far as I know i already set my maker can be run anywhere.
> 
> I installed my maker on /
> Then when i tried to run it on /media/nklee/2TB data/example$ maker ; i've got an error
> 
> ERROR: The directory is locked.  Perhaps by an instance of MAKER.
> 
> --> rank=NA, hostname=Lee-Server
>  
> I did checked it using nklee at Lee-Server:/media/nklee/2TB data$ maker
> and my maker is there.
> 
> May I know how to solve this problem?Thank you in advance.
> 
> Regards,
> Shaf
> 
> 
> 



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