[maker-devel] putative gene function by mapping to UniProt/Swiss-prot set

[Michael Campbell]

Hi Quanwei,

Correct. Just the best hit when blasting the MAKER generated fasta sequences to Swiss-prot.

Thanks,
Mike
> On Mar 17, 2017, at 6:37 PM, Quanwei Zhang <qwzhang0601 at gmail.com> wrote:
> 
> Hello:
> 
> I have a questions about the assigning putative gene function by mapping to UniProt/Swiss-prot gene set (described in the protocol published in 2014). 
> Here, for each of the gene model from Maker, the pipeline will find the most similar protein in UniProt/Swiss-prot and assign the function of the matched protein, right?
> It does not require best-reciprocal hit, right? 
> 
> Thanks
> Best
> Quanwei 
> _______________________________________________
> maker-devel mailing list
> maker-devel at box290.bluehost.com
> http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org