[maker-devel] MAKER only running 1 task

Seth Munholland munholl at uwindsor.ca
Wed May 10 14:24:49 MDT 2017


Hello,

I'm running a MAKER annotation on an ubuntu cluster and my top screen shows
the following:

Tasks: 831 total,   3 running, 826 sleeping,   0 stopped,   1 zombie

and my maker run (on a screen) shows:

...
total clusters:4 now processing 0
 ...processing 0 of 3
 ...processing 1 of 3
 ...processing 2 of 3
total clusters:4 now processing 0
flattening protein clusters
prepare section files
merging blast reports...
flattening protein clusters
prepare section files
merging blast reports...
flattening protein clusters
prepare section files

Of the 826, the vast majority of them are maker and only one of the running
tasks is maker.  Is this normal behaviour or has my maker run stopped
processing?

Seth Munholland, B.Sc.
Department of Biological Sciences
Rm. 304 Biology Building
University of Windsor
401 Sunset Ave. N9B 3P4
T: (519) 253-3000 Ext: 4755
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