[maker-devel] Post Processing of Annotations

[Ence,daniel]

Hi, The iprscan output should be in tsv format, which is tab-separated, and the usage statement for the maker_functional_gff says that the blastp output should be in “wu-blast -mformat 2”, which I think is tabbed too.

~Daniel

 
> On May 3, 2017, at 12:19 PM, Nathan Ricks <nathan.ricks at gmail.com> wrote:
> 
> Hi,
> I've been running your Maker pipeline, and I've reached Post Processing of Annotations portion. In your Online training you use the output.blastp and the outuput.iprscan files to help assign function.
> My question is what format do these files need to be in.
> Iprscan can produce files in a variety of formats: tsv, xml, gff3, html and SVG
> while blastp can produce the tabular, pairise, xml and a number of others.
> 
> Thanks
> 
> Nathan Ricks
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