[maker-devel] MPI vs multiple instance for speed

Patrick Tran Van patrick.tranvan at unil.ch
Wed Oct 18 05:47:35 MDT 2017


Hi Carson,


1) I think I have read one of your post saying that running maker with MPI is faster than multiple instance, can you explain why ?


2) I am trying to annotate a 1GB specie but it's superslow.

I have filtered the transcriptome to speed up the process but do you have other suggestion to increase the speed ?

Cheers,

Patrick Tran Van


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